Strain
Bat_MN611519
(Region: China; Strain: Tylonycteris pachypus bat coronavirus HKU4-related isolate GZ131656, complete genome.; Date: 18-Mar)
Gene
nonstructural protein NS3d
Description
Annotated in NCBI,
nonstructural protein NS3d
Location
GenBank Accession
Sequence
CDS
ATGGCTTTTTCAGCTTCTCTATTTCGGACTAAAACAGTCCATACTGAAGACGCATTGTGCCCTCGTTCGGCTATTCAGGCCGAACAGCCTCCTAATATCATAGACTGCATACCAGTTGCAGGCTATGAAGCTGCGTTAATTACTAATGCACTTTTCCTATTAGTATTATTTGTCTTTAATCCACTTACCTGTAAGGGAAATTGGATTAAAGCTATTTTATTTTACAGCTTACTGCTGTATAATATGATATTAGCCATATTTTTGGTTATTGATACACAACATTTTGTTAGTGCTTTGTTGCTAGCTTATGTTGTTACTTTTCTAGTCTTGTGGACTGCTGACCGAATTCGTCTCAGTTGTGCAGTTGGAAGTGTATTACCCTTTGTCGACATGAGATCTTCTTATATCCGTGTTGACAATGGTAACTCCAGTGTTGTAGTTCCAATGAACCACACAAAGCACTGGTTTATAAGAAATTTTGAGCAATCTTGTCATTGCGAAAATTGTTTCTATATTCACTCTTCATCTTATGTTGAGTGTACTTTTATTAGTCGCCTAAAGAAATCCACACTTGTATCAGTTTGTGATTTTTCTCTAGGTGGCAATGTTTCTACTGTTTTCGTTCCTCCTAGTGATAAAACAGTACCCCTTCACATAATCGCACCTAGCAAGCTATATGTTTAA
Protein
MAFSASLFRTKTVHTEDALCPRSAIQAEQPPNIIDCIPVAGYEAALITNALFLLVLFVFNPLTCKGNWIKAILFYSLLLYNMILAIFLVIDTQHFVSALLLAYVVTFLVLWTADRIRLSCAVGSVLPFVDMRSSYIRVDNGNSSVVVPMNHTKHWFIRNFEQSCHCENCFYIHSSSYVECTFISRLKKSTLVSVCDFSLGGNVSTVFVPPSDKTVPLHIIAPSKLYV
Summary
Uniprot
EMBL
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Multi-Pass Membrane
Topology
Length:
227
Number of predicted TMHs:
3
Exp number of AAs in TMHs:
61.8307300000001
Exp number, first 60 AAs:
21.19488
Total prob of N-in:
0.02485
POSSIBLE N-term signal
sequence
outside
1 - 36
TMhelix
37 - 59
inside
60 - 70
TMhelix
71 - 90
outside
91 - 93
TMhelix
94 - 111
inside
112 - 227
