Strain
Bat_MN611521
(Region: China; Strain: Scotophilus kuhlii bat coronavirus 512-related isolate HK140714, complete genome.; Date: 18-Mar)
Gene
nonstructural protein NS3
Description
Annotated in NCBI,
nonstructural protein NS3
Location
GenBank Accession
Sequence
CDS
ATGTTCCTCGGACTGTTCCAGTACACCATTGACTCAGTGGTAGAGAGCACTATTGAACAAGTAAACTTGTCACATCAAGAGGCTTTGGTGTTAGAAGAAAACATCATACCTCTTAGACAAGCTTCACATGTGACTGGTTTCTTACTTACCAGTGTTTTTGTTTACTTCTTTGCACTGTTCAAGGCTACCACCTTGCGGCGCAATTTGTTGCTTTTATGCGCACGTGTTTGCGCCATTTTACTTTATGCACCAATTTTAATAGTTTGTGGTGCATATTTAGATGCCATTATAGTAATTCTTACATTGACCGTGCGGTTAATGTATTTGGGTTACTTCTCATGGCGTTACAAAACTGCAAAATTTCTCATTTACAACTCTTCCACACTCATGTTTTTACATGGTCGTGCCAATTATTATAGTGGCAGACCTTATGTAATGCTTGAAGGTGGAAGCCATTATCTCAACTTTGGTACAGACCCGATACCATTTGTTAGTCGTTCAAGTCTGTATCTTGCTATTCGTGGCAGAAGTGAACAAGACATCCAATTACTGAGAACTGTAGAACTGTTAGACGGTAATTACCTCTACATTTTCTCCAGTTGCCAAATAGTTGGTGTCACTAATTCTGCTTTTGAAGAGATTCAACTAGACGAATATGCTTCAATTAGTGAATGA
Protein
MFLGLFQYTIDSVVESTIEQVNLSHQEALVLEENIIPLRQASHVTGFLLTSVFVYFFALFKATTLRRNLLLLCARVCAILLYAPILIVCGAYLDAIIVILTLTVRLMYLGYFSWRYKTAKFLIYNSSTLMFLHGRANYYSGRPYVMLEGGSHYLNFGTDPIPFVSRSSLYLAIRGRSEQDIQLLRTVELLDGNYLYIFSSCQIVGVTNSAFEEIQLDEYASISE
Summary
Uniprot
EMBL
Pfam
PF03053
Corona_NS3b
Interpro
IPR004293
Coronavirus_Orf3b
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Multi-Pass Membrane
Topology
Length:
224
Number of predicted TMHs:
3
Exp number of AAs in TMHs:
60.26442
Exp number, first 60 AAs:
19.2848
Total prob of N-in:
0.00906
POSSIBLE N-term signal
sequence
outside
1 - 40
TMhelix
41 - 60
inside
61 - 68
TMhelix
69 - 91
outside
92 - 94
TMhelix
95 - 114
inside
115 - 224
