Strain
Bat_MN611521
(Region: China; Strain: Scotophilus kuhlii bat coronavirus 512-related isolate HK140714, complete genome.; Date: 18-Mar)
Gene
nucleocapsid protein
Description
Annotated in NCBI,
nucleocapsid protein
Location
GenBank Accession
Sequence
CDS
ATGGCTTCTGTCAAATTCCAGAAACGCGGTCGTTCCAAAGGCCGTGTCCCGTTGTCCATTTATGCACCTCTCAGGGTTACAGATGAGAAACCACTTTTTAAGGTCCTACCAAACAATGCTGTTCCGAAGGGAATGGGTGGTAAGGACGAACAGATTGGATACTGGGTTGAACAGCCAAGGTGGCGGATGCGACGTGGAGAACGCGTCGATTTGCTCTCCAACTGGCATTTCTACTACCTTGGTACTGGACCGCATAGTGACCTACCTTTCAGAAAGCGCACGGATGGTGTTTTCTGGGTTGCGCGCGATGGTGCCAAAACTGAACCCACTAAGCTTGGTACGCGTAAGCCTACCACACCAAACAACTCCAGAGCTAACTCAAGGAGTCGTAGTCGTGGTGGACAGTSCAGGGGTGGATCTTCTAACAGAGATAATGCCAACAAGTCCAGAAACCAATCCAGAAACAGGAGCCAGTCTAATGACCGTGGGTCTAACTCACAGGATGACTTAGTGGCTGCTGTTAGAAAAGCTCTCAAAGACCTTGGAGTTGGTTCAGATGGACAAAAACCCAAGAGTGCTAAAAACACCAATGGTAAAAACACACCTAAGGTCAAGTCTAGGTCAGGCTCTAAGCAACGCTCTGAAGTCAAGGACAAACCAGAGTGGCGTCGGACACCTAGTGGTGATGAGTCAGTCGAAGTTTGTTTTGGACCCCGTGGAGGATTCAAAAATTTTGGAACCACCGACTTTGTCAATAATGGTGTGAATGCCTCAGGCTACGCCCAAGCTGCTGCTCTAGTACCTGGTGCAGCTGCATTGCTCTTTGGTGGTAACGTTACWSMTACAAAATGRTCGTCCCCAAAGACGACAAGAACCTCGAGATATTCCGTGCTCAGATTGACGCCTACAAACTTGGTGACCCCAAGCCACAGCGGAAACCTAAGAAGGAACGTTCTCCCACTCCTAAACCATCAGAAGAACCAGTCTATGATGACGTGGCTGCTGATCCTGCCTACGCGAACCTTGAATGGGACACTACGGCAGATGACGGTGTGGAGATTGTCAACGAGGTCTTTGACACTCAGAATTGAATTCAACTAA
Protein
MASVKFQKRGRSKGRVPLSIYAPLRVTDEKPLFKVLPNNAVPKGMGGKDEQIGYWVEQPRWRMRRGERVDLLSNWHFYYLGTGPHSDLPFRKRTDGVFWVARDGAKTEPTKLGTRKPTTPNNSRANSRSRSRGGQXRGGSSNRDNANKSRNQSRNRSQSNDRGSNSQDDLVAAVRKALKDLGVGSDGQKPKSAKNTNGKNTPKVKSRSGSKQRSEVKDKPEWRRTPSGDESVEVCFGPRGGFKNFGTTDFVNNGVNASGYAQAAALVPGAAALLFGGNVTXTKXSSPKTTRTSRYSVLRLTPTNLVTPSHSGNLRRNVLPLLNHQKNQSMMTWLLILPTRTLNGTLRQMTVWRLSTRSLTLRIEFN
Summary
Uniprot
Pubmed
EMBL
ProteinModelPortal
PDB
5N4K
E-value=3e-38 Score= 134 Identity=61.11%
Cov(Q)=29.51% Cov(P)=72.00%
3D Structure
Ontologies
Subcellular Location
From MSLVP
Nucleus
Topology
Length:
366
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
2.38165
Exp number, first 60 AAs:
0.00016
Total prob of N-in:
0.03641
outside
1 - 366
