Strain
Human_2019-nCoV_MN996529
(Region: China: Wuhan; Strain: Wuhan seafood market pneumonia virus isolate WIV05, complete genome.; Date: 30-Dec-19)
Gene
nonstructural protein NS7b
Description
Annotated in NCBI,
nonstructural protein NS7b
Location
GenBank Accession
Full name
Non-structural protein 7b
Alternative Name
Accessory protein 7b
Sequence
CDS
ATGATTGAACTTTCATTAATTGACTTCTATTTGTGCTTTTTAGCCTTTCTGCTATTCCTTGTTTTAATTATGCTTATTATCTTTTGGTTCTCACTTGAACTGCAAGATCATAATGAAACTTGTCACGCCTAA
Protein
MIELSLIDFYLCFLAFLLFLVLIMLIIFWFSLELQDHNETCHA
Summary
Miscellaneous
Bat coronavirus 279/2005 is highly similar to SARS-CoV (SARS-like).
Keywords
Host membrane
Membrane
Transmembrane
Transmembrane helix
Feature
chain Non-structural protein 7b
Uniprot
Pubmed
EMBL
Proteomes
Pfam
PF11395
DUF2873
Interpro
IPR021532
SARS-CoV_Orf7b
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Single-Pass Membrane
From Uniprot
Host membrane
Topology
Length:
43
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
22.57333
Exp number, first 60 AAs:
22.57333
Total prob of N-in:
0.64155
POSSIBLE N-term signal
sequence
outside
1 - 9
TMhelix
10 - 32
inside
33 - 43
