Strain
Bat_MN996532
(Region: China; Strain: Bat coronavirus isolate RaTG13, complete genome.; Date: 24-Jul-13)
Gene
nonstructural protein NS7a
Description
Annotated in NCBI,
nonstructural protein NS7a
Location
GenBank Accession
Sequence
CDS
ATGAAAATTATTCTTTTCTTGGTACTGGTAACACTTGCTACTTGTGAGCTTTATCACTACCAAGAGTGTGTTAGAGGTACAACAGTACTTCTAAAAGAACCTTGCTCTTCTGGAACGTATGAAGGCAATTCACCATTCCATCCTCTAGCTGATAATAAATTTGCACTGACTTGCTTTAGCACTCAATTTGCTTTTGCTTGTCCTGACGGCGTGAAACACGTCTATCAGTTACGTGCCAGATCAGTTTCACCCAAACTGTTCATCAGACAAGAGGAAGTTCAAGAACTTTACTCACCAATTTTTCTTATCATTGCAGCAATAGTGTTTATAACACTTTGCTTCACACTCAAAAGAAAAACAGAATGA
Protein
MKIILFLVLVTLATCELYHYQECVRGTTVLLKEPCSSGTYEGNSPFHPLADNKFALTCFSTQFAFACPDGVKHVYQLRARSVSPKLFIRQEEVQELYSPIFLIIAAIVFITLCFTLKRKTE
Summary
Uniprot
Pubmed
EMBL
Proteomes
Pfam
PF08779
SARS_X4
SUPFAM
SSF117066
SSF117066
Gene 3D
ProteinModelPortal
PDB
1XAK
E-value=5e-52 Score= 158 Identity=87.80%
Cov(Q)=67.77% Cov(P)=98.80%
3D Structure
Ontologies
Subcellular Location
From MSLVP
Host nucleus > host nucleolus. Host cytoplasm. Secreted.
Topology
Length:
121
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
21.86119
Exp number, first 60 AAs:
1.16652
Total prob of N-in:
0.07561
outside
1 - 96
TMhelix
97 - 116
inside
117 - 121
