Strain
Pangolin_MT121216
(Region: China; Strain: Pangolin coronavirus; Date: 2019/3/29)
Gene
ORF7a protein
Description
Annotated in NCBI,
ORF7a protein
Location
GenBank Accession
Full name
SARS_X4 domain-containing protein
Sequence
CDS
ATGAAAATTATTCTTTTCTTGGCATTGATAACACTTGCTACTTGTGAGCTTTATCATTATCAAGAGTGTGTTAGAGGTACAACAGTACTTTTAAAAGAACCTTGCTCTTCTGGAACATATGAAGGCAACTCACCTTTTCATCCTCTAGCTGATAACAAATTTGCACTGACTTGCTTTAGCACTCAATTTGCTTTTGCTTGTCCTGACGGTGTTAAACACATCTACCAGCTACGTGCACGAGCAGTTTCACCTAAACTGTTCATCAGACAAGAGGAAGTTCAAGAACTTTACTCACCAATTTTTCTCATAGTTGCGGCGATAGTGTTTATAACACTCTGCTTCACACTTAAGAGAAAGATAGAATGA
Protein
MKIILFLALITLATCELYHYQECVRGTTVLLKEPCSSGTYEGNSPFHPLADNKFALTCFSTQFAFACPDGVKHIYQLRARAVSPKLFIRQEEVQELYSPIFLIVAAIVFITLCFTLKRKIE
Summary
Uniprot
Pubmed
EMBL
Proteomes
Pfam
PF08779
SARS_X4
SUPFAM
SSF117066
SSF117066
Gene 3D
ProteinModelPortal
PDB
1YO4
E-value=6e-51 Score= 155 Identity=89.29%
Cov(Q)=69.42% Cov(P)=96.55%
3D Structure
Ontologies
Subcellular Location
From MSLVP
Topology
Length:
121
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
21.38691
Exp number, first 60 AAs:
0.71175
Total prob of N-in:
0.05199
outside
1 - 96
TMhelix
97 - 116
inside
117 - 121
