Strain
Human_229E_NC_002645
(Region: Germany; Strain: Human coronavirus 229E, complete genome.; Date: 1992)
Gene
4a protein
Description
Annotated in NCBI,
4a protein
Location
GenBank Accession
Sequence
CDS
ATGGCTCTAGGTTTGTTCACATTGCAACTTGTGTCTGCTGTTAATCAATCGCTTAGCAATGCGAAAGTTAGTGCTGAAGTTTCACGACAGGTTATCCAAGACGTGAAAGATGGCACTGTTACCTTCAACTTGCTAGCGTATACACTAATGAGCCTCTTTGTTGTGTATTTTGCTTTATTTAAAGCAAGATCACACCGTGGCAGAGCTGCTCTTATAGTGTTTAAAATTCTAATCCTTTTCGTTTATGTGCCATTGCTGTATTGGTCTCAAGCATATATTTACGCAACTTTGATTGCTGTAATTTTGCTTGGAAGATTTTTCCATACAGCTTGGCACTGCTGGCTCTACAAGACATGGGATTTCATTGTCTTCAATGTAACCACACTTTGCTATGCAAGGTAA
Protein
MALGLFTLQLVSAVNQSLSNAKVSAEVSRQVIQDVKDGTVTFNLLAYTLMSLFVVYFALFKARSHRGRAALIVFKILILFVYVPLLYWSQAYIYATLIAVILLGRFFHTAWHCWLYKTWDFIVFNVTTLCYAR
Summary
Uniprot
EMBL
Pfam
PF03053
Corona_NS3b
Interpro
IPR004293
Coronavirus_Orf3b
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Multi-Pass Membrane
Topology
Length:
133
Number of predicted TMHs:
3
Exp number of AAs in TMHs:
64.23233
Exp number, first 60 AAs:
21.82958
Total prob of N-in:
0.00572
POSSIBLE N-term signal
sequence
outside
1 - 37
TMhelix
38 - 60
inside
61 - 66
TMhelix
67 - 89
outside
90 - 92
TMhelix
93 - 115
inside
116 - 133
