Strain
Bat_NC_009021
(Region: China: Guangdong province; Strain: Bat coronavirus HKU9-1, complete genome.; Date: 2005)
Gene
small membrane protein
Description
Annotated in NCBI,
small membrane protein
Location
GenBank Accession
Sequence
CDS
ATGTATGATATTGTAGGCACTAATAATTCTATTCTTATAGCTAATGTTTTAGTGCTTATTATAATCTGTTTGTTAGTTGTTATAGTCGGTTGCGCATTGCTCCTGATTTTACAATTTGTTTTTGGTGTTTGTGGGTTTGTGTTCAAATTTGTGTGCAAACCTACAATTCTCGTTTATAATAAATTTAGAAACGAATCACTCTTGAACGAACGCGAAGAATTACTTTGTGACAATGTCTAA
Protein
MYDIVGTNNSILIANVLVLIIICLLVVIVGCALLLILQFVFGVCGFVFKFVCKPTILVYNKFRNESLLNEREELLCDNV
Summary
Uniprot
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Host nucleus. Host cytoplasm.
Topology
Length:
79
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
36.89476
Exp number, first 60 AAs:
36.8495
Total prob of N-in:
0.80035
POSSIBLE N-term signal
sequence
inside
1 - 11
TMhelix
12 - 34
outside
35 - 37
TMhelix
38 - 60
inside
61 - 79
