CoVDB Coronavirus Database (v3)   
Strain
Avian_NC_011549 (Region: Hong Kong;  Strain: Thrush coronavirus HKU12-600, complete genome.;  Date: 7-Jan)
Gene
nonstructural protein
Description
Annotated in NCBI,  nonstructural protein
Location
NC_011549(+):23899-24174
GenBank Accession
YP_002308500.1
 

Sequence

CDS
ATGTGCAACTGCCTTTACCAGGTTAAAGCACTTGTTGAATATAGCAAAACACATGGAAAAACAGATGTTTTGGAGCTTCTTGACCCACTTGTCAAGACTCGGTGTTTTGCTTATACACTCGTGGTATGTATTAATGCTAATCCAGTTGCATTTAGTATATTACCTCGGAAATTACTTATCAATGGTGAGCCTCTCCTTATTGAATATGGCAATGTTTATGGAAAGGATTTTATCATTAGACCATCTTTGCAAGTTATTCTTGAAGAAGAATGTTAA
Protein
MCNCLYQVKALVEYSKTHGKTDVLELLDPLVKTRCFAYTLVVCINANPVAFSILPRKLLINGEPLLIEYGNVYGKDFIIRPSLQVILEEEC

Summary

Uniprot
H9BR20  
Pubmed
22278237   
EMBL
JQ065047    AFD29229.1   
Proteomes
UP000132721   
ProteinModelPortal
H9BR20  

Ontologies

KEGG
vg:11945657    

Subcellular Location

From MSLVP
Single-Pass Membrane

Topology

Length:
91
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
3.78239
Exp number, first 60 AAs:
3.78019
Total prob of N-in:
0.60036
inside
1  -  91
 
 
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