Strain
Murine_NC_034972
(Region: China; Strain: Coronavirus AcCoV-JC34, complete genome.; Date: 11-Oct)
Gene
ORF3
Description
Annotated in NCBI,
ORF3
Location
GenBank Accession
Sequence
CDS
ATGATAGGTGGTCTTTTTTCAGTAGGGTTTGAACAGTTTATACAACATGCTAATGTCACCACAGGTGGTGCACTCACCGCACTTGCCGCTCAACCTCTGATTAATTATGGCACTGCAGTTTTTAGTGTTTACAGCTGCTTCTTTTTGTCTTTCTTTGCACTCTACAGTGTTAAGTCAGACAGAGCCAATTGTCTGTTGCTCTTTTTGCGACTGTTGACGCTATTTGTTGCAGTGCCTATTTTGTTTTGTACAGGTTATTATATAGATGGCTCTTTAACAATCCTCATACTGCTTAGCCGCTTTTGCTACCTAATATATTATTGTGTGCGGTTTAAGCGGCTTCATTTCATTCTATATAACACCAGTACACTGCTTTTCGCACAGGGTCGTTGTGTACCCTATGTCAAATTACATTATTTTGCCAATTATGCGGCACTTTATGGTGGCGCTGGTCATCTGATGCTAGGCCGCAAAGTTATTAATTTTACTGAAGCGCGCAATGTAGTACTTGCAGTGCGTGGTAGGTTACAGGAGGACTTACTGTTGGCTCGCGTTGTAGAACTAGCTAACGGTGAGTGCATCTATATTTTTACCAAAGAACCTGCAGTCAGTGTTTATAACTTTAGTTTTCAACCACTTAACTAA
Protein
MIGGLFSVGFEQFIQHANVTTGGALTALAAQPLINYGTAVFSVYSCFFLSFFALYSVKSDRANCLLLFLRLLTLFVAVPILFCTGYYIDGSLTILILLSRFCYLIYYCVRFKRLHFILYNTSTLLFAQGRCVPYVKLHYFANYAALYGGAGHLMLGRKVINFTEARNVVLAVRGRLQEDLLLARVVELANGECIYIFTKEPAVSVYNFSFQPLN
Summary
Uniprot
Pubmed
EMBL
Pfam
PF03053
Corona_NS3b
Interpro
IPR004293
Coronavirus_Orf3b
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Multi-Pass Membrane
Topology
Length:
214
Number of predicted TMHs:
3
Exp number of AAs in TMHs:
76.5883
Exp number, first 60 AAs:
22.65737
Total prob of N-in:
0.01573
POSSIBLE N-term signal
sequence
outside
1 - 31
TMhelix
32 - 54
inside
55 - 65
TMhelix
66 - 88
outside
89 - 91
TMhelix
92 - 109
inside
110 - 214
