Strain
Porcine_NC_038861
(Region: USA:Indiana; Strain: Transmissible gastroenteritis virus complete genome, genomic RNA.; Date: )
Gene
membrane protein
Description
Annotated in NCBI,
membrane protein
Location
GenBank Accession
Sequence
CDS
ATGAAGATTTTGTTAATATTAGCGTGTGTGATTGCATGCGCATGTGGAGAACGCTATTGTGCTATGAAATCCGATACAGATTTGTCATGTCGCAATAGTACAGCGTCTGATTGTGAGTCATGCTTCAACGGAGGCGATCTTATTTGGCATCTTGCAAACTGGAACTTCAGCTGGTCTATAATATTGATCGTTTTTATAACTGTGCTACAATATGGAAGACCTCAATTCAGCTGGTTCGTGTATGGCATTAAAATGCTTATAATGTGGCTATTATGGCCCGTTGTTTTGGCTCTTACGATTTTTAATGCATACTCGGAATACCAAGTGTCCAGATATGTAATGTTCGGCTTTAGTATTGCAGGTGCAATTGTTACATTTGTACTCTGGATTATGTATTTTGTAAGATCCATTCAGTTGTACAGAAGGACTAAGTCTTGGTGGTCTTTCAACCCTGAAACTAAAGCAATTCTTTGCGTTAGTGCATTAGGAAGAAGCTATGTGCTTCCTCTCGAAGGTGTGCCAACTGGTGTCACTCTAACTTTGCTTTCAGGGAATTTGTACGCTGAAGGGTTCAAAATTGCAGGTGGTATGAACATCGACAATTTACCAAAATACGTAATGGTTGCATTACCTAGCAGGACTATTGTCTACACACTTGTTGGCAAGAAGTTGAAAGCAAGTAGTGCGACTGGATGGGCTTACTATGTAAAATCTAAAGCTGGTGATTACTCAACAGAGGCAAGAACTGATAATTTGAGTGAGCAAGAAAAATTATTACATATGGTATAA
Protein
MKILLILACVIACACGERYCAMKSDTDLSCRNSTASDCESCFNGGDLIWHLANWNFSWSIILIVFITVLQYGRPQFSWFVYGIKMLIMWLLWPVVLALTIFNAYSEYQVSRYVMFGFSIAGAIVTFVLWIMYFVRSIQLYRRTKSWWSFNPETKAILCVSALGRSYVLPLEGVPTGVTLTLLSGNLYAEGFKIAGGMNIDNLPKYVMVALPSRTIVYTLVGKKLKASSATGWAYYVKSKAGDYSTEARTDNLSEQEKLLHMV
Summary
Uniprot
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Host nucleus. Host cytoplasm.
Topology
Length:
262
Number of predicted TMHs:
3
Exp number of AAs in TMHs:
74.2039200000001
Exp number, first 60 AAs:
17.51896
Total prob of N-in:
0.42972
POSSIBLE N-term signal
sequence
outside
1 - 46
TMhelix
47 - 69
inside
70 - 75
TMhelix
76 - 98
outside
99 - 112
TMhelix
113 - 135
inside
136 - 262
