Strain
Hedgehog_NC_039207
(Region: Germany; Strain: Betacoronavirus Erinaceus/VMC/DEU/2012 isolate ErinaceusCoV/2012-174/GER/2012, complete genome.; Date: 2012)
Gene
orf8b
Description
Annotated in NCBI,
orf8b
Location
GenBank Accession
Sequence
CDS
ATGGAAATCAACAAAATGGAAATAATCGAGGTAGACCAAGACAACCTAAACCTCGACCAGCCCCAAATGTTTCTGTCTCATGGTACACTGGCATTACACAGCATGGTAAGCAGCCTCTTGCCTTTCCGGCTGGACAAGGCGTACCCCTTAATGCCAATTCTACACCCAAGCAAAATGCAGGGTATTGGCGCAGACAAGACAGAAAGCTTAATACAGGCAATGGTGTTAAACAATTGGCCCCCAGGTGGTATTTCTACTACACTGGAACAGGACCAGAAGCTAACCTGCCATTCAGAACAGTCAAAGATGGCATCTACTGGGTTTGGGAAGAAGGTGCTAGTGAAGCCCCTTCAGATTTTGGTACCAGGAATCCTGCTAATGACGCAGCTATTGTCACGCAGTTCGCGCCTGGCACTCAATTACCTAAAAATTGCCACATTGAGGGCACTGGAGGTAATAGTCAGTCATCTTCTAGAGCGTCCAGCGCTAGCAGAAACTCCAGCAGATCTAATTCCAGAGGCTCCCAACCTGGTAGTAGAAGTCACTCACCAGGAAGTGTTGGACCCTCAGATGCATCAGCACTGCTCTATCTTGAACTAG
Protein
MEINKMEIIEVDQDNLNLDQPQMFLSHGTLALHSMVSSLLPFRLDKAYPLMPILHPSKMQGIGADKTESLIQAMVLNNWPPGGISTTLEQDQKLTCHSEQSKMASTGFGKKVLVKPLQILVPGILLMTQLLSRSSRLALNYLKIATLRALEVIVSHLLERPALAETPADLIPEAPNLVVEVTHQEVLDPQMHQHCSILN
Summary
Uniprot
EMBL
ProteinModelPortal
Ontologies
Subcellular Location
From MSLVP
Host nucleus. Host cytoplasm.
Topology
Length:
199
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.29386
Exp number, first 60 AAs:
0.25316
Total prob of N-in:
0.14823
outside
1 - 199
