CoVDB Coronavirus Database (v3)   
Strain
Avian_NC_046965 (Region: Canada;  Strain: Canada goose coronavirus;  Date: 17-Aug)
Gene
ORF8b
Description
Annotated in NCBI,  ORF8b
Location
NC_046965(+):25964-26221
GenBank Accession
YP_009755907.1
 

Sequence

CDS
ATGAATAATCCTTTTGCAACCGCAACAGCAAGAAAAGCTCGCGTGGTTTGTTTAAATAGAGGTGCAAGAAGTGTCTATTTTCTTAACAAACAAGGACTTCCCGTTCCTTGTCCCCATTGCACTACGCTCGTCGTTCGTGGCCTTCTTTGTGAAGAACACCAGTTCGACGACAATATCTATATAGGATGGCATCCAGAGGGAACTCTAGAACACGCCAGAACCAGGGTGGGAAATCGGATGCTCCAGCACCGGTTCTAA
Protein
MNNPFATATARKARVVCLNRGARSVYFLNKQGLPVPCPHCTTLVVRGLLCEEHQFDDNIYIGWHPEGTLEHARTRVGNRMLQHRF

Summary

Uniprot
A0A023PNP0  
Pubmed
26482289   
EMBL
KJ425486    KJ425490    KJ425491    KJ425495    KJ425499    KJ425501    + More
KJ435285    KT736031    AHX25908.1    AHX25944.1    AHX25953.1    AHX25989.1    AHX26025.1    AHX26043.1    AHX26169.1    AMK51944.1   
Proteomes
UP000097868    UP000102121    UP000107224    UP000120642    UP000159206    UP000163887    + More
UP000173109    UP000174151   
Pfam
PF05528   Coronavirus_5
Interpro
IPR008458   Coronavirus_5
ProteinModelPortal
A0A023PNP0  

Ontologies

Subcellular Location

From MSLVP

Topology

Length:
85
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0072
Exp number, first 60 AAs:
0.0072
Total prob of N-in:
0.43722
outside
1  -  85
 
 
Copyright@ 2018-2023    Any Comments and suggestions mail to:  zhuzl@cqu.edu.cn, mg@cau.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号
In processing...
Login to ASFVdb
Email
Password
Please go to Regist if without an account.
If you have forgotten your password, you can once again Regist an account with a registed or new email.
Cancel Go
Change my password
Enter new password
Reenter new password
Cancel Go
Regist an account of ASFVdb
It is required that you provide your institutional e-mail address (with edu or org in the domain) as confirmation of your affiliation.
Enter email
Reenter email
First Name
Last Name
Institution
You can directly go to if with an account.
Cancel Regist
Registraion Success
Your password has been sent to your email.
Please check it and login later.
Welcome to use ASFVdb.
OK