CoVDB Coronavirus Database (v3)   
 
Demo 1 Demo 2 Clear
Found: 12 items
Strain: Human_2019-nCoV_MT451263 Gene: QJR89205.1 S surface glycoprotein
Pfam:    Corona_S2 Spike_NTD Spike_rec_bind
PDBID score Evalue Identity Align-Len Cov. (Q) Cov. (T) Q-Span T-Span Analyze in iCn3D
6VXX 2339 0.0 96.33 1199 94.19% 93.60% 13 - 1211 32 - 1230 Analyze View alignments
6VYB 2338 0.0 96.25 1199 94.19% 93.60% 13 - 1211 32 - 1230 Analyze View alignments
6VSB 2335 0.0 96.41 1197 94.03% 92.93% 12 - 1208 12 - 1208 Analyze View alignments
See More +
Strain: Human_2019-nCoV_MT451263 Gene: QJR89203.1 ORF1 ORF1ab polyprotein
Pfam:    Nsp1 SUD-M Macro NSP11 NAR DUF3655 nsp7 nsp8 Corona_RPol_N Corona_NSP4_C Nsp3_PL2pro NSP10 nsp9 Peptidase_C30 Viral_protease NSP16
PDBID score Evalue Identity Align-Len Cov. (Q) Cov. (T) Q-Span T-Span Analyze in iCn3D
6M71 1944 0.0 99.14 932 13.13% 98.94% 4393 - 5324 1 - 932 Analyze View alignments
7BTF 1944 0.0 99.14 932 13.13% 98.94% 4393 - 5324 1 - 932 Analyze View alignments
6NUS 1886 0.0 95.28 933 13.15% 97.70% 4391 - 5323 1 - 933 Analyze View alignments
See More +
Strain: Human_2019-nCoV_MT451263 Gene: QJR89213.1 N nucleocapsid phosphoprotein
Pfam:    Corona_nucleoca
PDBID score Evalue Identity Align-Len Cov. (Q) Cov. (T) Q-Span T-Span Analyze in iCn3D
6M3M 280 9e-95 99.25 134 31.98% 98.53% 41 - 174 3 - 136 Analyze View alignments
6YI3 275 2e-92 98.48 132 31.50% 94.29% 43 - 174 3 - 134 Analyze View alignments
6VYO 265 4e-89 99.21 127 30.31% 99.22% 47 - 173 2 - 128 Analyze View alignments
See More +
Strain: Human_2019-nCoV_MT451263 Gene: QJR89208.1 M membrane glycoprotein
Pfam:    Corona_M
Strain: Human_2019-nCoV_MT451263 Gene: QJR89207.1 E envelope protein
Pfam:    NS3_envE
PDBID score Evalue Identity Align-Len Cov. (Q) Cov. (T) Q-Span T-Span Analyze in iCn3D
5X29 58.2 4e-13 88.71 62 82.67% 76.54% 4 - 65 20 - 81 Analyze View alignments
2MM4 56.2 2e-12 91.38 58 77.33% 100.00% 8 - 65 1 - 58 Analyze View alignments
Strain: Human_2019-nCoV_MT451263 Gene: QJR89204.1 ORF1a polyprotein
Pfam:    Nsp1 SUD-M Macro NSP11 NAR DUF3655 nsp7 nsp8 Corona_RPol_N Corona_NSP4_C Nsp3_PL2pro NSP10 nsp9 Peptidase_C30 Viral_protease NSP16
PDBID score Evalue Identity Align-Len Cov. (Q) Cov. (T) Q-Span T-Span Analyze in iCn3D
5R7Z 642 0.0 99.02 306 6.95% 100.00% 3264 - 3569 1 - 306 Analyze View alignments
5R80 642 0.0 99.02 306 6.95% 100.00% 3264 - 3569 1 - 306 Analyze View alignments
5R83 642 0.0 99.02 306 6.95% 100.00% 3264 - 3569 1 - 306 Analyze View alignments
See More +
Strain: Human_2019-nCoV_MT451263 Gene: QJR89206.1 ORF3a protein
Pfam:    APA3_viroporin
Strain: Human_2019-nCoV_MT451263 Gene: QJR89209.1 ORF6 protein
Pfam:    Sars6
Strain: Human_2019-nCoV_MT451263 Gene: QJR89210.1 ORF7a protein
Pfam:    SARS_X4
PDBID score Evalue Identity Align-Len Cov. (Q) Cov. (T) Q-Span T-Span Analyze in iCn3D
1XAK 157 2e-51 88.89 81 66.94% 97.59% 15 - 95 2 - 82 Analyze View alignments
1YO4 157 2e-51 90.48 84 69.42% 96.55% 16 - 98 3 - 86 Analyze View alignments
Strain: Human_2019-nCoV_MT451263 Gene: QJR89211.1 ORF7b
Pfam:    DUF2873
Strain: Human_2019-nCoV_MT451263 Gene: QJR89212.1 ORF8 protein
Pfam:    Corona_NS8
Strain: Human_2019-nCoV_MT451263 Gene: QJR89214.1 ORF10 protein
Pfam:   
Copyright@ 2018-2023    Any Comments and suggestions mail to:  zhuzl@cqu.edu.cn, mg@cau.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号
In processing...
Login to ASFVdb
Email
Password
Please go to Regist if without an account.
If you have forgotten your password, you can once again Regist an account with a registed or new email.
Cancel Go
Change my password
Enter new password
Reenter new password
Cancel Go
Regist an account of ASFVdb
It is required that you provide your institutional e-mail address (with edu or org in the domain) as confirmation of your affiliation.
Enter email
Reenter email
First Name
Last Name
Institution
You can directly go to if with an account.
Cancel Regist
Registraion Success
Your password has been sent to your email.
Please check it and login later.
Welcome to use ASFVdb.
OK
Directing to target position