Strain | Gene | Type | Sub Loc | Uniprot Sublocation | Topology | |
---|---|---|---|---|---|---|
Human_2019-nCoV_MT044258 | QHZ87591.1 | ORF1 |
Host membrane |
outside 1 - 2222 TMhelix 2223 - 2245 inside 2246 - 2328 TMhelix 2329 - 2351 outside 2352 - 2355 TMhelix 2356 - 2378 inside 2379 - 2764 TMhelix 2765 - 2787 outside 2788 - 3034 TMhelix 3035 - 3057 inside 3058 - 3068 TMhelix 3069 - 3091 outside 3092 - 3095 TMhelix 3096 - 3118 inside 3119 - 3126 TMhelix 3127 - 3149 outside 3150 - 3569 TMhelix 3570 - 3587 inside 3588 - 3593 TMhelix 3594 - 3616 outside 3617 - 3630 TMhelix 3631 - 3653 inside 3654 - 3673 TMhelix 3674 - 3693 outside 3694 - 3724 TMhelix 3725 - 3747 inside 3748 - 3766 TMhelix 3767 - 3789 outside 3790 - 7088 |
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Human_2019-nCoV_MT044258 | QHZ87592.1 | S |
Host cell membrane Accumulates in the endoplasmic reticulum-Golgi intermediate compartment, where it participates in virus particle assembly. Some S oligomers are transported to the host plasma membrane, where they may mediate cell-cell fusion. referred by 1 publications |
outside 1 - 1213 TMhelix 1214 - 1236 inside 1237 - 1273 |
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Human_2019-nCoV_MT044258 | QHZ87593.1 |
|
outside 1 - 33 TMhelix 34 - 56 inside 57 - 76 TMhelix 77 - 99 outside 100 - 102 TMhelix 103 - 125 inside 126 - 275 |
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Human_2019-nCoV_MT044258 | QHZ87594.1 | E |
Host Golgi apparatus membrane The cytoplasmic tail functions as a Golgi complex-targeting signal. referred by 1 publications |
inside 1 - 11 TMhelix 12 - 34 outside 35 - 75 |
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Human_2019-nCoV_MT044258 | QHZ87595.1 | M |
|
outside 1 - 19 TMhelix 20 - 39 inside 40 - 50 TMhelix 51 - 73 outside 74 - 77 TMhelix 78 - 100 inside 101 - 222 |
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Human_2019-nCoV_MT044258 | QHZ87596.1 |
|
outside 1 - 61 |
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Human_2019-nCoV_MT044258 | QHZ87597.1 |
|
outside 1 - 96 TMhelix 97 - 116 inside 117 - 121 |
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Human_2019-nCoV_MT044258 | QHZ87598.1 |
|
outside 1 - 121 |
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Human_2019-nCoV_MT044258 | QHZ87599.1 | N |
Virion Located inside the virion, complexed with the viral RNA. Probably associates with ER-derived membranes where it participates in viral RNA synthesis and virus budding. referred by 1 publications |
outside 1 - 419 |
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Human_2019-nCoV_MT044258 | QHZ87600.1 |
|
outside 1 - 38 |
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