CoVDB Coronavirus Database (v3)   
 
Demo 1 Demo 2 Demo 3 Clear
Found: 12 items
Strain Gene Type Sub Loc Uniprot Sublocation Topology
Human_2019-nCoV_MT345877 QJA17346.1 ORF1 Host membrane
outside 1 - 2230
TMhelix 2231 - 2253
inside 2254 - 2336
TMhelix 2337 - 2359
outside 2360 - 2363
TMhelix 2364 - 2386
inside 2387 - 2772
TMhelix 2773 - 2795
outside 2796 - 3042
TMhelix 3043 - 3065
inside 3066 - 3076
TMhelix 3077 - 3111
outside 3112 - 3125
TMhelix 3126 - 3148
inside 3149 - 3581
TMhelix 3582 - 3604
outside 3605 - 3608
TMhelix 3609 - 3628
inside 3629 - 3634
TMhelix 3635 - 3657
outside 3658 - 3671
TMhelix 3672 - 3694
inside 3695 - 3714
TMhelix 3715 - 3737
outside 3738 - 3751
TMhelix 3752 - 3771
inside 3772 - 3777
TMhelix 3778 - 3800
outside 3801 - 7096
Human_2019-nCoV_MT345877 QJA17347.1 Host membrane
outside 1 - 2230
TMhelix 2231 - 2253
inside 2254 - 2336
TMhelix 2337 - 2359
outside 2360 - 2363
TMhelix 2364 - 2386
inside 2387 - 2772
TMhelix 2773 - 2795
outside 2796 - 3042
TMhelix 3043 - 3065
inside 3066 - 3076
TMhelix 3077 - 3111
outside 3112 - 3125
TMhelix 3126 - 3148
inside 3149 - 3581
TMhelix 3582 - 3604
outside 3605 - 3608
TMhelix 3609 - 3628
inside 3629 - 3634
TMhelix 3635 - 3657
outside 3658 - 3671
TMhelix 3672 - 3694
inside 3695 - 3714
TMhelix 3715 - 3737
outside 3738 - 3751
TMhelix 3752 - 3771
inside 3772 - 3777
TMhelix 3778 - 3800
outside 3801 - 4405
Human_2019-nCoV_MT345877 QJA17348.1 S Host cell membrane
Accumulates in the endoplasmic reticulum-Golgi intermediate compartment, where it participates in virus particle assembly. Some S oligomers are transported to the host plasma membrane, where they may mediate cell-cell fusion.
referred by 1 publications
outside 1 - 1213
TMhelix 1214 - 1236
inside 1237 - 1273
Human_2019-nCoV_MT345877 QJA17349.1

outside 1 - 33
TMhelix 34 - 56
inside 57 - 76
TMhelix 77 - 99
outside 100 - 102
TMhelix 103 - 125
inside 126 - 275
Human_2019-nCoV_MT345877 QJA17350.1 E Host Golgi apparatus membrane
The cytoplasmic tail functions as a Golgi complex-targeting signal.
referred by 1 publications
inside 1 - 11
TMhelix 12 - 34
outside 35 - 75
Human_2019-nCoV_MT345877 QJA17351.1 M

outside 1 - 19
TMhelix 20 - 39
inside 40 - 50
TMhelix 51 - 73
outside 74 - 77
TMhelix 78 - 100
inside 101 - 222
Human_2019-nCoV_MT345877 QJA17352.1

outside 1 - 61
Human_2019-nCoV_MT345877 QJA17353.1

outside 1 - 96
TMhelix 97 - 116
inside 117 - 121
Human_2019-nCoV_MT345877 QJA17354.1 Host membrane
outside 1 - 9
TMhelix 10 - 32
inside 33 - 43
Human_2019-nCoV_MT345877 QJA17355.1

outside 1 - 121
Human_2019-nCoV_MT345877 QJA17356.1 N Virion
Located inside the virion, complexed with the viral RNA. Probably associates with ER-derived membranes where it participates in viral RNA synthesis and virus budding.
referred by 1 publications
outside 1 - 419
Human_2019-nCoV_MT345877 QJA17357.1

outside 1 - 38
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