Strain | Gene | Type | Sub Loc | Uniprot Sublocation | Topology | |
---|---|---|---|---|---|---|
Human_2019-nCoV_MT375436 | QJD47140.1 | ORF1 |
Host membrane |
outside 1 - 2317 TMhelix 2318 - 2340 inside 2341 - 2346 TMhelix 2347 - 2369 outside 2370 - 2378 TMhelix 2379 - 2401 inside 2402 - 2772 TMhelix 2773 - 2795 outside 2796 - 3042 TMhelix 3043 - 3065 inside 3066 - 3076 TMhelix 3077 - 3111 outside 3112 - 3125 TMhelix 3126 - 3148 inside 3149 - 3580 TMhelix 3581 - 3603 outside 3604 - 3617 TMhelix 3618 - 3640 inside 3641 - 3644 TMhelix 3645 - 3667 outside 3668 - 3681 TMhelix 3682 - 3701 inside 3702 - 3720 TMhelix 3721 - 3740 outside 3741 - 3749 TMhelix 3750 - 3772 inside 3773 - 3778 TMhelix 3779 - 3801 outside 3802 - 7096 |
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Human_2019-nCoV_MT375436 | QJD47141.1 |
Host membrane |
outside 1 - 2317 TMhelix 2318 - 2340 inside 2341 - 2346 TMhelix 2347 - 2369 outside 2370 - 2378 TMhelix 2379 - 2401 inside 2402 - 2772 TMhelix 2773 - 2795 outside 2796 - 3042 TMhelix 3043 - 3065 inside 3066 - 3076 TMhelix 3077 - 3111 outside 3112 - 3125 TMhelix 3126 - 3148 inside 3149 - 3580 TMhelix 3581 - 3603 outside 3604 - 3617 TMhelix 3618 - 3640 inside 3641 - 3644 TMhelix 3645 - 3667 outside 3668 - 3681 TMhelix 3682 - 3701 inside 3702 - 3720 TMhelix 3721 - 3740 outside 3741 - 3749 TMhelix 3750 - 3772 inside 3773 - 3778 TMhelix 3779 - 3801 outside 3802 - 4405 |
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Human_2019-nCoV_MT375436 | QJD47142.1 | S |
Host cell membrane Accumulates in the endoplasmic reticulum-Golgi intermediate compartment, where it participates in virus particle assembly. Some S oligomers are transported to the host plasma membrane, where they may mediate cell-cell fusion. referred by 1 publications |
outside 1 - 1213 TMhelix 1214 - 1236 inside 1237 - 1273 |
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Human_2019-nCoV_MT375436 | QJD47143.1 |
|
outside 1 - 33 TMhelix 34 - 56 inside 57 - 76 TMhelix 77 - 99 outside 100 - 102 TMhelix 103 - 125 inside 126 - 275 |
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Human_2019-nCoV_MT375436 | QJD47144.1 | E |
Host Golgi apparatus membrane The cytoplasmic tail functions as a Golgi complex-targeting signal. referred by 1 publications |
inside 1 - 11 TMhelix 12 - 34 outside 35 - 75 |
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Human_2019-nCoV_MT375436 | QJD47145.1 | M |
|
outside 1 - 14 TMhelix 15 - 37 inside 38 - 48 TMhelix 49 - 71 outside 72 - 75 TMhelix 76 - 98 inside 99 - 220 |
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Human_2019-nCoV_MT375436 | QJD47146.1 |
|
outside 1 - 61 |
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Human_2019-nCoV_MT375436 | QJD47147.1 |
|
outside 1 - 96 TMhelix 97 - 116 inside 117 - 121 |
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Human_2019-nCoV_MT375436 | QJD47148.1 |
Host membrane |
outside 1 - 9 TMhelix 10 - 32 inside 33 - 43 |
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Human_2019-nCoV_MT375436 | QJD47149.1 |
|
outside 1 - 121 |
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Human_2019-nCoV_MT375436 | QJD47150.1 | N |
Virion Located inside the virion, complexed with the viral RNA. Probably associates with ER-derived membranes where it participates in viral RNA synthesis and virus budding. referred by 1 publications |
outside 1 - 419 |
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Human_2019-nCoV_MT375436 | QJD47151.1 |
|
outside 1 - 38 |
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