Strain | Gene | Type | Sub Loc | Uniprot Sublocation | Topology | |
---|---|---|---|---|---|---|
Human_2019-nCoV_MT451590 | QJR93127.1 | ORF1 |
Host membrane |
outside 1 - 2230 TMhelix 2231 - 2253 inside 2254 - 2336 TMhelix 2337 - 2359 outside 2360 - 2363 TMhelix 2364 - 2386 inside 2387 - 2773 TMhelix 2774 - 2796 outside 2797 - 3042 TMhelix 3043 - 3065 inside 3066 - 3076 TMhelix 3077 - 3111 outside 3112 - 3125 TMhelix 3126 - 3148 inside 3149 - 3580 TMhelix 3581 - 3603 outside 3604 - 3606 TMhelix 3607 - 3629 inside 3630 - 3635 TMhelix 3636 - 3658 outside 3659 - 3682 TMhelix 3683 - 3702 inside 3703 - 3721 TMhelix 3722 - 3741 outside 3742 - 3750 TMhelix 3751 - 3773 inside 3774 - 3779 TMhelix 3780 - 3802 outside 3803 - 7097 |
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Human_2019-nCoV_MT451590 | QJR93128.1 |
Host membrane |
outside 1 - 2230 TMhelix 2231 - 2253 inside 2254 - 2336 TMhelix 2337 - 2359 outside 2360 - 2363 TMhelix 2364 - 2386 inside 2387 - 2773 TMhelix 2774 - 2796 outside 2797 - 3042 TMhelix 3043 - 3065 inside 3066 - 3076 TMhelix 3077 - 3111 outside 3112 - 3125 TMhelix 3126 - 3148 inside 3149 - 3580 TMhelix 3581 - 3603 outside 3604 - 3606 TMhelix 3607 - 3629 inside 3630 - 3635 TMhelix 3636 - 3658 outside 3659 - 3682 TMhelix 3683 - 3702 inside 3703 - 3721 TMhelix 3722 - 3741 outside 3742 - 3750 TMhelix 3751 - 3773 inside 3774 - 3779 TMhelix 3780 - 3802 outside 3803 - 4406 |
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Human_2019-nCoV_MT451590 | QJR93129.1 | S |
Host cell membrane Accumulates in the endoplasmic reticulum-Golgi intermediate compartment, where it participates in virus particle assembly. Some S oligomers are transported to the host plasma membrane, where they may mediate cell-cell fusion. referred by 1 publications |
outside 1 - 1213 TMhelix 1214 - 1236 inside 1237 - 1273 |
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Human_2019-nCoV_MT451590 | QJR93130.1 |
|
outside 1 - 33 TMhelix 34 - 56 inside 57 - 76 TMhelix 77 - 99 outside 100 - 102 TMhelix 103 - 125 inside 126 - 275 |
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Human_2019-nCoV_MT451590 | QJR93131.1 | E |
Host Golgi apparatus membrane The cytoplasmic tail functions as a Golgi complex-targeting signal. referred by 1 publications |
inside 1 - 11 TMhelix 12 - 34 outside 35 - 75 |
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Human_2019-nCoV_MT451590 | QJR93132.1 | M |
|
outside 1 - 19 TMhelix 20 - 39 inside 40 - 50 TMhelix 51 - 73 outside 74 - 77 TMhelix 78 - 100 inside 101 - 222 |
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Human_2019-nCoV_MT451590 | QJR93133.1 |
|
outside 1 - 61 |
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Human_2019-nCoV_MT451590 | QJR93134.1 |
|
outside 1 - 96 TMhelix 97 - 116 inside 117 - 121 |
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Human_2019-nCoV_MT451590 | QJR93135.1 |
Host membrane |
outside 1 - 9 TMhelix 10 - 32 inside 33 - 43 |
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Human_2019-nCoV_MT451590 | QJR93136.1 |
|
outside 1 - 121 |
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Human_2019-nCoV_MT451590 | QJR93137.1 | N |
Virion Located inside the virion, complexed with the viral RNA. Probably associates with ER-derived membranes where it participates in viral RNA synthesis and virus budding. referred by 1 publications |
outside 1 - 419 |
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Human_2019-nCoV_MT451590 | QJR93138.1 |
|
outside 1 - 38 |
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