Strain

CANADA_HS_2003_NC_004718 (Region: Canada: Toronto;  Strain: SARS coronavirus, complete genome.;  Date: 2003)

Gene

hypothetical protein sars8a

Description

Annotated in NCBI,  hypothetical protein sars8a

Location

NC_004718(+):27779-27898

GenBank Accession

NP_849176.1

Full name

Protein non-structural 8a      

Alternative Name

Accessory protein 8a

CDS

ATGAAACTTCTCATTGTTTTGACTTGTATTTCTCTATGCAGTTGCATATGCACTGTAGTACAGCGCTGTGCATCTAATAAACCTCATGTGCTTGAAGATCCTTGTAAGGTACAACACTAG

Protein

MKLLIVLTCISLCSCICTVVQRCASNKPHVLEDPCKVQH

Keywords

Reference proteome   Signal  

Feature

chain  Protein non-structural 8a

Uniprot

Q6SRQ3   Q6SRW8   Q7TA15   Q6SRS8   C4P6R5   Q6SRT3   + More
Q6SRV3   Q3S2B7   Q6SRU8   Q6SRW3   Q6SRV8   Q6SRS3   Q6SRY3   Q6SRT8   Q6SRR3   Q6SRQ8   B8Q8S1   Q6SRX8   Q6S8C9   Q6SRR8   Q6SRX3   Q6SRY8   Q76XZ7   Q6SRU3   Q19QW2   A0A3G5BJ38   D2E1F5   D2E229   D2E273   D2E1E0   H9CHU8   Q7TFA0   F2YKH0   Q6T1D4   Q1EFN7   Q1EFM4   A0A2D1PX66  

Pubmed

15809907    14527350    14733771    16112670    15035025    15109406    + More
17222058    19370068    30393776    14569023    20463816    22412934    12730500    12730501    12917450    14709660    16625834    29190287   

EMBL

AY451873    AAS44686.1    AY451860    AAS44621.1    AH012999    AAP82972.1    + More
AY451868    AAS44661.1    FJ882963    ACQ82733.1    AY451867    AAS44656.1    AY451863    AAS44636.1    DQ182595    ABA02275.1    AY451864    AAS44641.1    AY451861    AAS44626.1    AY451862    AAS44631.1    AY451869    AAS44666.1    AY451857    AAS44606.1    AY451866    AAS44651.1    AY451871    AAS44676.1    AY451872    AAS44681.1    EU371560    ACB69867.1    AY451858    AAS44611.1    AY463060    AAR86783.1    AY451870    AAS44671.1    AY451859    AAS44616.1    AY451856    AAS44601.1    AY290752    AAR27476.1    AY451865    AAS44646.1    AY310120    AY323977    AY427439    AY463059    DQ497008    DQ898174    AP006557    AP006558    AP006559    AP006560    AP006561    AAP50493.1    AAP72982.1    AAQ94068.1    AAR86793.1    ABF65844.1    ABI96966.1    BAC81356.1    BAC81370.1    BAC81384.1    BAC81398.1    BAC81412.1    MK062179    MK062180    MK062181    MK062182    MK062183    MK062184    AYV99797.1    FJ882927    FJ882932    FJ882933    FJ882934    FJ882935    FJ882936    FJ882937    FJ882938    FJ882939    FJ882946    FJ882949    JF292921    KF514388    KF514392    KF514394    KF514396    KF514397    KF514398    KF514399    KF514400    KF514404    KF514408    KF514409    KF514413    KF514415    KF514418    KF514419    KF514421    KF514422    KF514423    ACZ71775.1    ACZ71849.1    AEA11006.1    AGT20801.1    AGT20861.1    AGT20891.1    AGT20921.1    AGT20936.1    AGT20951.1    AGT20966.1    AGT20981.1    AGT21041.1    AGT21101.1    AGT21116.1    AGT21176.1    AGT21206.1    AGT21251.1    AGT21266.1    AGT21296.1    AGT21311.1    AGT21326.1    FJ882942    FJ882943    FJ882951    FJ882953    FJ882959    FJ882962    HQ890526    HQ890527    HQ890528    HQ890529    HQ890530    HQ890531    HQ890532    HQ890533    HQ890534    HQ890535    HQ890536    HQ890537    HQ890538    HQ890539    HQ890540    JF292902    JF292903    JF292904    JF292905    JF292906    ACZ71999.1    AEA10406.1    FJ882945    FJ882948    FJ882952    FJ882957    FJ882958    FJ882961    HQ890541    HQ890542    HQ890543    HQ890544    HQ890545    HQ890546    JF292907    JF292908    JF292909    JF292910    JF292911    JF292912    JF292913    JF292914    JF292915    JF292916    JF292917    JF292918    JF292919    JF292920    ACZ72043.1    AEA10631.1    FJ882926    FJ882928    FJ882929    FJ882930    FJ882931    FJ882940    FJ882941    FJ882944    FJ882950    FJ882954    FJ882955    FJ882956    FJ882960    KF514389    KF514390    KF514391    KF514393    KF514395    KF514401    KF514402    KF514403    KF514405    KF514406    KF514407    KF514410    KF514411    KF514412    KF514414    KF514416    KF514417    KF514420    ACZ71760.1    ACZ71804.1    ACZ71969.1    AGT20816.1    AGT20831.1    AGT20846.1    AGT20876.1    AGT20906.1    AGT20996.1    AGT21011.1    AGT21026.1    AGT21056.1    AGT21071.1    AGT21086.1    AGT21131.1    AGT21146.1    AGT21161.1    AGT21191.1    AGT21221.1    AGT21236.1    AGT21281.1    JQ316196    JN854286    AFD56981.1    AFK10262.1    AY278741    AY274119    AY291315    JF292922    AEA11021.1    AH013657    AAS01072.1    AY864805    AAY60788.1    AY864806    AAY60801.1    KY417144    ATO98140.1   

Proteomes

UP000112237    UP000163176    UP000105365    UP000133987    UP000103670    UP000109640    + More
UP000116351    UP000116947    UP000131569    UP000138690    UP000146108    UP000153467    UP000164441    UP000166757    UP000172416    UP000097931    UP000121467    UP000125925    UP000128288    UP000150617    UP000151673    UP000151756    UP000153830    UP000155701    UP000157930    UP000160899    UP000161442    UP000161729    UP000162782    UP000164349    UP000169779    UP000173963    UP000174280    UP000180434    UP000180435    UP000180436    UP000180437    UP000180438    UP000180439    UP000180440    UP000180441    UP000180442    UP000180443    UP000180444    UP000180445    UP000120111    UP000180409    UP000180410    UP000180411    UP000180412    UP000180413    UP000180414    UP000180415    UP000180416    UP000180417    UP000180418    UP000180419    UP000180420    UP000180421    UP000180422    UP000180423    UP000180424    UP000180425    UP000180426    UP000180427    UP000180428    UP000180429    UP000180430    UP000180431    UP000180432    UP000180433    UP000145008    UP000180383    UP000180384    UP000180385    UP000180386    UP000180387    UP000180388    UP000180389    UP000180390    UP000180391    UP000180393    UP000180394    UP000180395    UP000180396    UP000180397    UP000180398    UP000180399    UP000180400    UP000180401    UP000180402    UP000180403    UP000180404    UP000180405    UP000180406    UP000180407    UP000180408    UP000097852    UP000106870    UP000117796    UP000119316    UP000119820    UP000124542    UP000125968    UP000130610    UP000133348    UP000141212    UP000143912    UP000145152    UP000149516    UP000159535    UP000166143    UP000171773    UP000180363    UP000180364    UP000180365    UP000180366    UP000180367    UP000180368    UP000180369    UP000180370    UP000180371    UP000180372    UP000180373    UP000180374    UP000180375    UP000180377    UP000180378    UP000112510    UP000152329    UP000000354    UP000137377    UP000180376    UP000133349    UP000149347   

Pfam

PF12093   Corona_NS8

Interpro

IPR022722   Corona_NS8

ProteinModelPortal

Q6SRQ3   Q6SRW8   Q7TA15   Q6SRS8   C4P6R5   Q6SRT3   + More
Q6SRV3   Q3S2B7   Q6SRU8   Q6SRW3   Q6SRV8   Q6SRS3   Q6SRY3   Q6SRT8   Q6SRR3   Q6SRQ8   B8Q8S1   Q6SRX8   Q6S8C9   Q6SRR8   Q6SRX3   Q6SRY8   Q76XZ7   Q6SRU3   Q19QW2   A0A3G5BJ38   D2E1F5   D2E229   D2E273   D2E1E0   H9CHU8   Q7TFA0   F2YKH0   Q6T1D4   Q1EFN7   Q1EFM4   A0A2D1PX66  

KEGG

vg:1489676    

From MSLVP

Single-Pass Membrane

Length:

39

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

4.15178

Exp number, first 60 AAs:

4.15178

Total prob of N-in:

0.30065

outside

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