CoVDB Coronavirus Database Go to the lastest version >>
Strain
CHINA_AVIAN_2007_NC_016994 (Region: China: Hong Kong;  Strain: Night-heron coronavirus HKU19, complete genome.;  Date: 2007)
Gene
envelope protein
Description
Annotated in NCBI,  envelope protein
GenBank Accession
 

Sequence

CDS
ATGGAAGATTACGTTATCACTATACCAGCAATATACATCTTAGTGGCAGTTATTCTACTAGGCTGTATTGTTTTTCTACTTCTTATTAAGACATGCTTAGCATGCTGTGACTTTTTCACGCGCACCTACACATGTATATTACACACCGTAAAACCTATTTACGTTTATCTCAAACCTGCTCCTGTAGTGAGTAAGGAAGACTATATCAAATTTCATAAGTTCCCTCGAAACGACTGGCACCATGTCTGA
Protein
MEDYVITIPAIYILVAVILLGCIVFLLLIKTCLACCDFFTRTYTCILHTVKPIYVYLKPAPVVSKEDYIKFHKFPRNDWHHV

Summary

EMBL
JQ065047    AFD29227.1    JQ065044    AFD29202.1    FJ376622    ACJ12063.1    + More
FJ376621    ACJ12054.1    MK204388    QDY92322.1    LC364343    BBC54833.1    LC364342    BBC54823.1    LC364344    BBC54843.1    JQ065046    AFD29218.1    KT336560    MF431742    ALS54087.1    ASR75140.1    KJ567050    AHM88401.1    KJ769231    AIH06858.1    EF584908    ABQ39959.1    KJ601779    AIB07801.1    KJ601777    AIB07786.1    KJ601778    AIB07794.1    KM820765    AIT11901.1    KJ481931    AHL45008.1    KJ601780    AIB07808.1    LC216914    LC216915    BAY00724.1    BAY00731.1    JQ065042    JQ065043    KJ462462    KJ569769    KJ584355    KJ584356    KJ584357    KJ584358    KJ584359    KJ584360    KJ620016    KM012168    KT381613    AFD29188.1    AFD29195.1    AHN16221.1    AHN16228.1    AIA60974.1    AIA60981.1    AIA60988.1    AIA60995.1    AIA61002.1    AIA61008.1    AIA99519.1    AIP90487.1    ALJ32186.1    KP981395    KP757890    KP757891    KP757892    KT266822    KR131621    KT021234    KT313663    KT313664    KT313665    KT313666    KT313667    KT313668    KT313671    KR150443    KR265847    KR265848    KR265849    KR265850    KR265851    KR265852    KR265853    KR265854    KR265855    KR265856    KR265857    KR265858    KR265859    KR265860    KR265861    KR265862    KR265863    KR265864    KR265865    KU665558    KU051641    KU051642    KU051643    KU051644    KU051645    KU051646    KU051647    KU051648    KU051649    KU051650    KU051651    KU051653    KU051654    KU051655    KU051656    KU984334    KU517165    KU981059    KU981060    KU981061    KU981062    KX022602    KX022603    KX022604    KX022605    KX118627    KY065120    KX834351    KX834352    KX443143    KY354363    KY354364    KY364365    KY293677    KY293678    MF431743    MF095123    MF948005    KY398012    KY363867    KY363868    KY513724    MF041982    MF280390    MG242062    MG837130    MG837131    MG837132    MG837133    MH708123    MH708124    MH708125    MG832584    MH715491    LC260045    LC260038    LC260039    LC260040    LC260041    LC260042    LC260043    LC260044    MK005882    MK211169    MK355396    MK572803    MK330604    MK330605    AKA97939.1    AKC54429.1    AKC54436.1    AKC54443.1    AKQ63084.1    ALA13746.1    ALD83757.1    ALT00599.1    ALT00600.1    ALT00601.1    ALT00602.1    ALT00603.1    ALT00604.1    ALT00607.1    AML40605.1    AML40777.1    AML40784.1    AML40791.1    AML40798.1    AML40805.1    AML40812.1    AML40819.1    AML40826.1    AML40833.1    AML40840.1    AML40847.1    AML40854.1    AML40861.1    AML40868.1    AML40875.1    AML40882.1    AML40889.1    AML40896.1    AML40903.1    AML83917.1    AMN91622.1    AMN91628.1    AMN91634.1    AMN91640.1    AMN91646.1    AMN91652.1    AMN91658.1    AMN91664.1    AMN91671.1    AMN91677.1    AMN91683.1    AMN91695.1    AMN91701.1    AMN91707.1    AMN91713.1    AMW88198.1    ANA78297.1    ANA78444.1    ANI85826.1    ANI85833.1    ANI85840.1    ANI85847.1    AOM53028.1    APG38199.1    APZ76691.1    APZ76699.1    AQS99153.1    AQT34131.1    AQT34137.1    ARJ31775.1    ASK86335.1    ASK86342.1    ASR75148.1    ASY98688.1    ATJ00130.1    ATU88976.1    ATV90797.1    ATV90802.1    AUG59157.1    AUH28251.1    AVR48520.1    AVZ61083.1    AWG96866.1    AWG96873.1    AWG96879.1    AWG96885.1    AXP32217.1    AXP32224.1    AXP32231.1    AYP31079.1    AYU65235.1    BAZ95610.1    BBA66306.1    BBA66313.1    BBA66320.1    BBA66327.1    BBA66334.1    BBA66341.1    BBA66348.1    QCO76964.1    QDF21512.1    QDH76189.1    QDH76195.1    QDP14512.1    QDP14519.1    KU051652    AMN91689.1    KY513725    AUG59165.1    LC364345    LC364346    BBC54853.1    BBC54862.1    MH013336    AWR88315.1    MG812375    MG812376    AWV67108.1    AWV67117.1    MG812378    AWV67135.1    KY926512    ASS83087.1    MG812377    AWV67126.1    KT313669    KT313670    KT313672    KT313673    KT313674    ALT00605.1    ALT00606.1    ALT00608.1    ALT00609.1    ALT00610.1    FJ376620    ACJ12045.1    FJ376619    ACJ12036.1    JQ065048    AFD29235.1    MH532440    AXP20282.1    JQ065049    AFD29245.1    JQ065045    AFD29210.1    MF642322    MF642323    AWV96560.1    AWV96567.1    MF642324    AWV96574.1    MF642325    AWV96581.1   
PDB
4H6D     E-value=9.11277,     Score=59

Ontologies

Subcellular Location

From MSLVP
Host nucleus. Host cytoplasm.

Topology

Length:
82
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
23.37503
Exp number, first 60 AAs:
23.32952
Total prob of N-in:
0.11944
POSSIBLE N-term signal
sequence
outside
1  -  4
TMhelix
5  -  27
inside
28  -  82
 
 

Population Genetic Test Statistics

Genomic alignment in the CDS region

 
 

Multiple alignment of Orthologues

 
 

Orthologous in Strains

Strain Availability Status Gene
CHINA_HS_2019_MN908947    
CHINA_AVIAN_2008_NC_016995    
CHINA_AVIAN_2007_NC_016991    
CHINA_MURINE_2015_NC_035191    
CANADA_AVIAN_2007_NC_010800    
USA_PIG_2000_NC_038861    
CHINA_AVIAN_2007_NC_011549    
ITALY_PIG_2009_NC_028806    
GERMANY_PIG_2012_LT545990    
CHINA_AVIAN_2007_NC_016992    
CHINA_BAT_2005_NC_009657    
CANADA_HS_2003_NC_004718    
CHINA_BAT_2014_NC_030886    
CHINA_BAT_2005_NC_018871    
USA_MURINE_2009_NC_012936    
CHINA_RABBIT_2006_NC_017083    
UK_PIG_2000_NC_003436    
ROMANIA_PIG_2015_LT898435    
ROMANIA_PIG_2015_LT898436    
GERMANY_PIG_2015_LT898444    
GERMANY_PIG_2015_LT898414    
GERMANY_PIG_2015_LT898439    
GERMANY_PIG_2015_LT898413    
GERMANY_PIG_2015_LT898412    
GERMANY_PIG_2015_LT898411    
GERMANY_PIG_2015_LT898416    
GERMANY_PIG_2015_LT898443    
GERMANY_PIG_2015_LT898420    
GERMANY_PIG_2015_LT898408    
GERMANY_PIG_2015_LT898423    
GERMANY_PIG_2015_LT898432    
GERMANY_PIG_2015_LT898409    
GERMANY_PIG_2015_LT898425    
GERMANY_PIG_2015_LT898446    
GERMANY_PIG_2014_LT898438    
GERMANY_PIG_2014_LT898440    
GERMANY_PIG_2014_LT900501    
GERMANY_PIG_2014_LT898427    
GERMANY_PIG_2014_LT898415    
GERMANY_PIG_2014_LT898421    
GERMANY_PIG_2014_LT898431    
GERMANY_PIG_2014_LT898410    
GERMANY_PIG_2014_LT900498    
GERMANY_PIG_2014_LT898430    
GERMANY_PIG_1978_LT897799    
GERMANY_PIG_2014_LT898447    
GERMANY_PIG_2014_LT898426    
GERMANY_PIG_2014_LT898417    
GERMANY_PIG_2014_LT900500    
GERMANY_PIG_2014_LT898445    
AUSTRIA_PIG_2015_LT898418    
AUSTRIA_PIG_2015_LT898441    
AUSTRIA_PIG_2015_LT898433    
AUSTRIA_PIG_2015_LT900502    
GERMANY_PIG_2015_LT900499    
BELGIUM_PIG_1980_LT906620    
BELGIUM_PIG_1977_LT905450    
SWITZERLAND_PIG_2003_LT905451    
BELGIUM_PIG_1978_LT906581    
UK_PIG_1987_LT906582    
CHINA_PIG_2009_NC_016990    
CHINA_PIG_2010_NC_039208    
KENYA_BAT_2010_KY073745    
KENYA_BAT_2010_NC_032107    
CHINA_AVIAN_2007_NC_016994 Protein
YP_005352864.1
EUROPE_MURINE_2004_AY700211    
CHINA_AVIAN_2007_NC_011550    
USA_MURINE_1997_NC_001846    
USA_MURINE_1998_NC_023760    
MID_EAST_HS_2012_NC_019843    
CHINA_AVIAN_2007_NC_016993    
CHINA_MURINE_2013_NC_032730    
USA_HS_2004_AY585228    
NETHERLAND_HS_2004_NC_005831    
CHINA_HS_2004_NC_006577    
EUROPE_HS_2000_NC_002645    
NETHERLAND_FERRET_2010_NC_030292    
JAPAN_FERRET_2013_LC119077    
USA_FELINE_2005_NC_002306    
CHINA_MURINE_2011_NC_034972    
CHINA_AVIAN_2007_NC_016996    
ARABIA_CAMEL_2015_NC_028752    
CHINA_AVIAN_2007_NC_011547    
CHINA_BAT_2012_NC_028824    
CHINA_BAT_2013_NC_028814    
CHINA_BAT_2013_NC_028833    
CHINA_BAT_2011_NC_028811    
USA_BOVIN_2001_NC_003045    
CHINA_MURINE_2012_NC_026011    
GERMANY_ERINACEINAE_2012_NC_022643    
GERMANY_ERINACEINAE_2012_NC_039207    
UK_HS_2012_NC_038294    
AMERICA_WHALE_2007_NC_010646    
CHINA_BAT_2013_NC_025217    
UGANDA_BAT_2013_NC_034440    
CHINA_BAT_2006_NC_009021    
CHINA_BAT_2008_NC_010438    
CHINA_BAT_2006_NC_009020    
CHINA_BAT_2006_NC_009019    
CHINA_BAT_2006_NC_009988    
USA_BAT_2006_NC_022103    
BULGARIA_BAT_2008_NC_014470    
CHINA_BAT_2008_NC_010437    
USA_AVIAN_2004_NC_001451    
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