Strain

CHINA_BAT_2011_NC_028811 (Region: China;  Strain: BtMr-AlphaCoV/SAX2011, complete genome.;  Date: 2011)

Gene

membrane glycoprotein

Description

Annotated in NCBI,  membrane glycoprotein

Location

NC_028811(+):25349-26032

GenBank Accession

YP_009199612.1

Full name

Membrane protein      

Alternative Name

E1 glycoprotein
Matrix glycoprotein
Membrane glycoprotein

CDS

ATGAGCGACAATAGTACTGTCCCCGTCGCGGACGTTATTGAACATCTTAGAAATTGGAGTTTTGCCTGGAACATCCTATTAACTCTGTTGATAGCGCTGCTCCAGTATGGCAATTTTAAGTACAGCAAGCTCCTTTACGGGCTTAAGATGGCAATGTTGTGGCTGCTATGGCCTTGTGTTATAGCATTGTCCATAACTAATGCTTGGGCTGACTTTAATGTTAACTGGGCGTATTTTGGCATCAGCATTTTTATGCTTGTTGTCACATTAGTACTCTGGATTATGTATTTTGTGAACAGTTTCCGCCTTTACAGGCGTACCAGGAGCTTCTGGGCCTTTAACCCGGAAACTGATTCAATTATCGTTTTCTCTGTCTATGGAACAACCTATTCCATTCCAGTGATCCAAGCCCCGCAGGGCATTACATTCACAGTCCTGAGTGGTACACTTTTGGTCGACGGCATAAAAGTTGCAACAGGTGTGCGCATTGAAGCGCTACCGCAATATGTCACTGTAGCTAAAGCTACAACTACCATTGTGTTCCACAGAGTAGGCAAAGCCGTGAATGAAAGGACCCAGACGGGATGGCTGTTCTTTGTACGGTCGGGCTATGGTGACTACGCTGCTCATTCAACCGGTACAGGACAAATGACAGAAAGCGAAAAATTACTTCATATAGCTTAA

Protein

MSDNSTVPVADVIEHLRNWSFAWNILLTLLIALLQYGNFKYSKLLYGLKMAMLWLLWPCVIALSITNAWADFNVNWAYFGISIFMLVVTLVLWIMYFVNSFRLYRRTRSFWAFNPETDSIIVFSVYGTTYSIPVIQAPQGITFTVLSGTLLVDGIKVATGVRIEALPQYVTVAKATTTIVFHRVGKAVNERTQTGWLFFVRSGYGDYAAHSTGTGQMTESEKLLHIA

Function

Component of the viral envelope that plays a central role in virus morphogenesis and assembly via its interactions with other viral proteins.

Subunit

Homomultimer. Interacts with envelope E protein in the budding compartment of the host cell, which is located between endoplasmic reticulum and the Golgi complex. Forms a complex with HE and S proteins. Interacts with nucleocapsid N protein. This interaction probably participates in RNA packaging into the virus.

Miscellaneous

Bat coronavirus 512/2005 is highly similar to porcine epidemic diarrhea virus (PEDV).

Similarity

Belongs to the alphacoronaviruses M protein family.

Keywords

Glycoprotein   Host Golgi apparatus   Host membrane   Membrane   Transmembrane   Transmembrane helix   Viral envelope protein   Viral matrix protein   Virion   Reference proteome  

Feature

chain  Membrane protein

Uniprot

A0A0U1WHE8   A0A1W5YKT0   A0A1W5YKT6   A0A3G8EWC3   A0A0U1UZC6   A0A0U1WHF2   + More
A0A0U1UZB2   A0A0U1WJV1   A0A0U1UYW3   F1DB23   A0A0U1WJU7   A0A4Y5QL73   F1DAX9   A0A4Y5QL69   A0A4Y6GME6   A0A482JXA6   A0A2P1G6J7   A8JP03   A0A482K1V6   A0A2P1G6H6   A0A0U1WHF0   A0A410N739   A0A2D1BHB6   A0A2P1G6R8   A0A3G1II33   A0A346LQ18   A8JNZ5   A0A2P1G6J1   A0A482K0E0   A0A5B9Y8P9   B1PHK5   K4K1Y9   A0A3G8EYW6   A0A3G8EWJ7   A0A2S1WCF2   A0A2P1G6K5   K4KCT7   K4JZP2   A0A0U1WHF8   K4JZB1   F1DB17   A0A482K1Y2   A0A1P8NPR6   P59771   A0A0F7L0A6   A0A249JPV0   A0A1Y0DD49   G8G0X2   A0A0U1YIU9   I6YQD5   A0A0U1YFS8   G8GN34   A0A2K8IYQ4   Q0Q463   A0A3G3NGI6   A0A3G3NHN0   A0A3G3NGU8   A0A3G3NGS9   A0A4P8YSI7   A0A3G3NH93   A0A166ZM26   A0A4Y6GMD9   A0A2H4WQM2   A0A4Y6A782   A0A1D8MIQ1   A0A4Y6GN26   A0A2H4WQM0   A0A0U1YGU7   A0A0S1LIY9   A0A4Y5MW43   K9YHW3   G8G0X8   A0A5K1KBA1   A0A410JAK8   A0A3G3NHP6   A0A5K1KBA5   A0A4Y6GMD0   A0A1U9XPM0   B2LT68   G8G0X6   W8GLL9   A0A482D1I5   G8G0W9   J7GX11   L0BDB1   H9CTW4   G8FVS7   B2LT69   A0A1S6XZR2   A0A5K1KB83   B2CQ43   A0A220T0W9   A0A0U1YJQ8   A0A0K0WTU6   D3U0E7   D3U0D9   A0A4Y6GN38   A0A0U1VF09   A0A4P8GK29   Q692M0  

Pubmed

28384506    30447246    27125516    19239771    22561208    31067830    + More
29618817    17617433    30171801    31207129    28654418    31419711    18420807    22933277    29704627    30103259    28284624    8291230    9782358    11724265    8397280    26112783    28534849    22528639    23599287    26611909    29540176    16840328    26847648    22966198    23087112    23166239    23166262    22843324    23685898    23969052    25125639    25694517    26063495    30380612    25279722    22923806    21210162    22532530    18214664   

EMBL

KJ473806    AIA62249.1    KY770851    ARI44796.1    KY770850    ARI44791.1    + More
MH938448    AZF86121.1    KJ473807    AIA62255.1    KJ473809    AIA62268.1    KJ473797    AIA62215.1    KJ473799    AIA62230.1    KJ473800    AIA62237.1    HQ728486    ADX59498.1    KJ473798    AIA62223.1    MK720945    MK720946    QCX35173.1    QCX35184.1    HQ728480    ADX59454.1    MK720944    QCX35163.1    MK211373    QDF43812.1    MG916903    QBP43284.1    MF094688    AVM80503.1    EF203065    EF203066    EF203067    ABQ57219.1    ABQ57227.1    ABQ57235.1    MG916902    QBP43273.1    MF094685    AVM80478.1    KJ473808    AIA62262.1    MH539766    QAS69031.1    MF370205    ATN23892.1    MG557844    MF094681    MF094682    MF094683    MF094684    MF769416    MF769417    MF769418    MF769419    MF769420    MF769421    MF769422    MF769423    MF769424    MF769425    MF769426    MF769427    MF769428    MF769429    MF769430    MF769431    MF769432    MF769433    MF769434    MF769435    MF769436    MF769437    MF769438    MF769439    MF769440    MF769441    MF769442    MF769443    MF769444    MG605090    MG605091    MK651076    AVM41573.1    AVM80442.1    AVM80451.1    AVM80460.1    AVM80469.1    AVM80527.1    AVM80536.1    AVM80545.1    AVM80554.1    AVM80563.1    AVM80572.1    AVM80581.1    AVM80590.1    AVM80599.1    AVM80608.1    AVM80617.1    AVM80626.1    AVM80635.1    AVM80644.1    AVM80653.1    AVM80662.1    AVM80671.1    AVM80680.1    AVM80689.1    AVM80698.1    AVM80707.1    AVM80716.1    AVM80725.1    AVM80734.1    AVM80743.1    AVM80752.1    AVM80761.1    AVM80770.1    AVM80779.1    AXY04086.1    AXY04095.1    QDE12100.1    MF167434    ASK51720.1    MH615810    AXP98442.1    EF203064    ABQ57211.1    MF094686    AVM80487.1    MG916901    QBP43262.1    MK977618    QEH62672.1    EU420139    ACA52174.1    JQ989270    AFU92107.1    MH938450    AZF86133.1    MH938449    AZF86127.1    MG742313    AWJ64266.1    MF094687    AVM80495.1    JQ989272    JQ989273    AFU92125.1    AFU92134.1    JQ989266    JQ989267    JQ989268    JQ989269    AFU92073.1    AFU92081.1    AFU92089.1    AFU92098.1    KJ473810    AIA62274.1    JQ989271    AFU92116.1    HQ728485    ADX59491.1    MH697599    QBP43303.1    KU893873    APX42140.1    Z24733    AF353511    Z14976    KR610991    KR610992    AKH45335.1    MF462814    ASY04646.1    KY929405    ART85702.1    JN089727    JN089733    AER39408.1    AER39414.1    KJ857390    AJD09513.1    JX002685    JX002693    KC109141    KC210146    KP162057    KT323979    AFN66538.1    AFN66546.1    AGD98688.1    AGG55743.1    AJW67221.1    ALS35471.1    KJ857395    AJD09518.1    JN173344    AET71243.1    KY619828    ATJ03683.1    DQ648858    MH687938    AYR18427.1    MH687943    MH687945    MH687946    MH687948    MH687954    MH687956    MH687958    AYR18458.1    AYR18470.1    AYR18476.1    AYR18484.1    AYR18516.1    AYR18528.1    AYR18540.1    MH687941    AYR18445.1    MH687937    MH687955    MH687960    MH687961    MH687965    AYR18421.1    AYR18522.1    AYR18552.1    AYR18558.1    AYR18582.1    MK138353    QCT24240.1    MH687963    MH687964    AYR18570.1    AYR18576.1    KU182966    ANA96051.1    MK211371    QDF43802.1    MG373543    AUD08950.1    MG923574    QDE55568.1    KU836638    AOV85637.1    MK211370    QDF43797.1    MG373540    AUD08947.1    KJ857381    AJD09504.1    KR818832    ALL27305.1    MK796238    QCW07224.1    JX869045    AFZ45985.1    JN083782    JN083783    JN083785    JN083787    JN089739    JN089740    JN089741    JN089745    JN089746    JQ654496    JQ305133    JQ723736    JQ710438    JX002686    JX002691    JX188454    JX489155    JX524137    JX501325    JX647847    KF384500    KJ960178    KJ960179    KJ960180    KM609204    KM089829    KR610993    KR610994    KP765609    KX010481    KX010484    KX010488    KY698022    KY928065    MF346935    MG373542    MG373544    MF581000    MH708895    MG983755    MH061339    MH581489    MH748550    MH726384    MH726385    MH726386    MH726387    MH726388    MH726389    MH726390    MH726391    MH726392    MH726393    MH726402    MH726403    MH726404    MK690502    MK644603    MK644605    MK656470    MK656471    MK656476    MK656477    MK656478    MK656479    MK656480    MK656481    MK656482    MK656483    AER35134.1    AER35135.1    AER35137.1    AER35139.1    AER39420.1    AER39421.1    AER39422.1    AER39426.1    AER39427.1    AFD64565.1    AFF60690.1    AFJ54357.1    AFK73393.1    AFN66539.1    AFN66544.1    AFQ37601.1    AFV09317.1    AFV46347.1    AFV59247.1    AFW99001.1    AGR51645.1    AJP67405.1    AKE53208.1    AKH45341.1    AKO90058.1    AND65698.1    AND65701.1    AND65705.1    ARD24434.1    ART84253.1    ASO67380.1    AUD08949.1    AUD08951.1    AWU22295.1    AYL64495.1    AYW03312.1    AZL47213.1    AZP53860.1    AZS18881.1    QCQ19933.1    QCQ19939.1    QCQ19945.1    QCQ19951.1    QCQ19957.1    QCQ19963.1    QCQ19969.1    QCQ19975.1    QCQ19981.1    QCQ19987.1    QCQ20041.1    QCQ20047.1    QCQ20053.1    QER78626.1    QFG01703.1    QFG01715.1    QFG71733.1    QFG71734.1    QFG71739.1    QFG71740.1    QFG71741.1    QFG71742.1    QFG71743.1    QFG71744.1    QFG71745.1    QFG71746.1    MH726406    QCQ20065.1    MK288006    MK656475    QAR17952.1    QFG71738.1    MH687967    AYR18594.1    MH726407    QCQ20071.1    MK211369    QDF43792.1    KY010201    KX852351    AQZ26212.1    ASK39757.1    EU581711    ACB87498.1    JN089737    JN173338    AER39418.1    AET71237.1    KJ001733    KJ001734    KJ645644    KR265824    KR265845    AHK25071.1    AHK25072.1    AID56724.1    AKJ22094.1    AKJ22208.1    MK392335    QBM00064.1    JN089730    KJ001737    AER39411.1    AHK25075.1    JX112709    AFP81692.1    KC294275    AFZ85195.1    JQ390542    AFD98086.1    JN083786    JX261936    AER35138.1    AFR54329.1    EU581712    ACB87499.1    KX791060    KY198294    AQX36345.1    ARM53695.1    MH726394    MH726395    MH726396    MH726397    MH726398    MH726399    MH726400    MH726401    QCQ19993.1    QCQ19999.1    QCQ20005.1    QCQ20011.1    QCQ20017.1    QCQ20023.1    QCQ20029.1    QCQ20035.1    EU542418    ACA81419.1    KX852353    ASK39759.1    KJ857380    AJD09503.1    KP768390    AKS26492.1    FJ687457    ACV81757.1    FJ687449    FJ687450    FJ687451    FJ687452    FJ687456    FJ687465    FJ687471    FJ687472    JQ023161    KJ857383    KJ857384    MF737355    ACV81749.1    ACV81750.1    ACV81751.1    ACV81752.1    ACV81756.1    ACV81765.1    ACV81771.1    ACV81772.1    AFE85965.1    AJD09506.1    AJD09507.1    ASW30997.1    MK211372    QDF43807.1    KJ857379    AJD09502.1    MH891589    QCO95425.1    AY653205    EU033964    KJ646598    KJ646603    KJ646604    MH061341    AAT75299.1    ABU50834.1    AIC82405.1    AIC82410.1    AIC82411.1    AZL47225.1   

Proteomes

UP000144778    UP000106394    UP000103794    UP000106776    UP000135768    UP000126502    + More
UP000110898    UP000096660    UP000130662    UP000152921    UP000104963    UP000166619    UP000143524    UP000155419    UP000112496    UP000126962    UP000119818    UP000123997    UP000126615    UP000132096    UP000144177    UP000162430    UP000008159    UP000156820    UP000171486    UP000096075    UP000134644    UP000180353    UP000180354    UP000113079    UP000137505    UP000100611    UP000102013    UP000107040    UP000112802    UP000114638    UP000128510    UP000133882    UP000137179    UP000150256    UP000150836    UP000150912    UP000157500    UP000172504    UP000109831    UP000130673    UP000168169    UP000126602    UP000117333    UP000122353   

Pfam

PF01635   Corona_M

Interpro

IPR002574   Corona_M
IPR042551   ALPHA_CORONA_M

ProteinModelPortal

A0A0U1WHE8   A0A1W5YKT0   A0A1W5YKT6   A0A3G8EWC3   A0A0U1UZC6   A0A0U1WHF2   + More
A0A0U1UZB2   A0A0U1WJV1   A0A0U1UYW3   F1DB23   A0A0U1WJU7   A0A4Y5QL73   F1DAX9   A0A4Y5QL69   A0A4Y6GME6   A0A482JXA6   A0A2P1G6J7   A8JP03   A0A482K1V6   A0A2P1G6H6   A0A0U1WHF0   A0A410N739   A0A2D1BHB6   A0A2P1G6R8   A0A3G1II33   A0A346LQ18   A8JNZ5   A0A2P1G6J1   A0A482K0E0   A0A5B9Y8P9   B1PHK5   K4K1Y9   A0A3G8EYW6   A0A3G8EWJ7   A0A2S1WCF2   A0A2P1G6K5   K4KCT7   K4JZP2   A0A0U1WHF8   K4JZB1   F1DB17   A0A482K1Y2   A0A1P8NPR6   P59771   A0A0F7L0A6   A0A249JPV0   A0A1Y0DD49   G8G0X2   A0A0U1YIU9   I6YQD5   A0A0U1YFS8   G8GN34   A0A2K8IYQ4   Q0Q463   A0A3G3NGI6   A0A3G3NHN0   A0A3G3NGU8   A0A3G3NGS9   A0A4P8YSI7   A0A3G3NH93   A0A166ZM26   A0A4Y6GMD9   A0A2H4WQM2   A0A4Y6A782   A0A1D8MIQ1   A0A4Y6GN26   A0A2H4WQM0   A0A0U1YGU7   A0A0S1LIY9   A0A4Y5MW43   K9YHW3   G8G0X8   A0A5K1KBA1   A0A410JAK8   A0A3G3NHP6   A0A5K1KBA5   A0A4Y6GMD0   A0A1U9XPM0   B2LT68   G8G0X6   W8GLL9   A0A482D1I5   G8G0W9   J7GX11   L0BDB1   H9CTW4   G8FVS7   B2LT69   A0A1S6XZR2   A0A5K1KB83   B2CQ43   A0A220T0W9   A0A0U1YJQ8   A0A0K0WTU6   D3U0E7   D3U0D9   A0A4Y6GN38   A0A0U1VF09   A0A4P8GK29   Q692M0  

PDB

4OVD     E-value=0.382479,     Score=75