CoVDB Coronavirus Database Go to the lastest version >>
Strain
GERMANY_ERINACEINAE_2012_NC_039207 (Region: Germany;  Strain: Betacoronavirus Erinaceus/VMC/DEU/2012 isolate ErinaceusCoV/2012-174/GER/2012, complete genome.;  Date: 2012)
Gene
orf4b
Description
Annotated in NCBI,  orf4b
GenBank Accession
Full name
Non-structural protein ORF4b      
 

Sequence

CDS
ATGATGGATTGTAGTGCACTAACACAGTCCAATGAAATTAGGAACCGGCGCTATGAGAAGCGACGCTGCTCTCCTGTTAGAGCAAGTGATTTGCAGGTTGCTACACAACCTACACATTACCTGCGTTTAACTTTTCCTCCCACACCACAATGGACTATTAGAAGAGGACTTACAATGGAAGATGTTGAGGTCTGGTTGTCTAATTATGACACCAAACCAGTCACTCAATATCACATTACTTTAGCACTCCTTGTCTTGGATAAAGATGAGAGCATTCCTGATATCACTAACTTTGCCAACATGTTTAGGCGTGTTAGGTTTGAGTTAAAAGACTTTAATGTGCTTGGCAGAACTCTTGTTCTTAATGCTACCGAGCTGGTTTGTGAAAATCCTTACCAGTATGATCTTAGCAATTTGCAAGAAAAGGTGGTACCTTGCATTAAACAACTGTTGTCATTACAACGTTATAAGTTGCATGATAGCGGTTTACCTTTACATTTATCAGTTAGCAAATTGCATGATTTAGAGCCTGAATACAGGTCTCATATCAGCAATGTTGTTTCCTATCGTCCGACATGTTTTGTAGCAAAGCCCACATCTGTAGAGCTTGTAACAACACGTGCATTTAACGGCGACACACCCAAGGTGGTCATGTCAGTGCCTATATATTAA
Protein
MMDCSALTQSNEIRNRRYEKRRCSPVRASDLQVATQPTHYLRLTFPPTPQWTIRRGLTMEDVEVWLSNYDTKPVTQYHITLALLVLDKDESIPDITNFANMFRRVRFELKDFNVLGRTLVLNATELVCENPYQYDLSNLQEKVVPCIKQLLSLQRYKLHDSGLPLHLSVSKLHDLEPEYRSHISNVVSYRPTCFVAKPTSVELVTTRAFNGDTPKVVMSVPIY

Summary

Function
Plays a role in the inhibition of host innate immunity by inhibiting the interaction between host IKBKE and MAVS. In turn, this inhibition prevents the production of host interferon beta. Additionally, inhibits host NF-kappa-B by interacting with host KPNA4 and thereby preventing the translocation of the NF-kappa-B complex into the nucleus by this importin (PubMed:29370303).
Subunit
Interacts with host KPNA4; this interaction inhibits the nuclear import of NF-kappa-B complex.
Keywords
Host cytoplasm   Host nucleus   Host-virus interaction   Inhibition of host IKBKE by virus   Inhibition of host innate immune response by virus   Inhibition of host NF-kappa-B by virus   Inhibition of host RLR pathway by virus   Reference proteome   Viral immunoevasion  
Feature
chain  Non-structural protein ORF4b
EMBL
KC545383    AGX27803.1    KC545386    AGX27814.1    MK679660    QCC20717.1    + More
KJ473821    AHY61340.1    LC469308    BBJ36011.1    MG021451    AVV62529.1    MF593268    ATQ39396.1    KC869678    AIG13099.1    KT368829    KT368830    KT368831    KT368832    ALA49399.1    ALA49410.1    ALA49421.1    ALA49432.1    KT368874    ALA49894.1    MG757599    AXN73462.1    KX574227    ARJ34229.1    MN120513    QDP16198.1    MN120514    QDP16209.1    MG011347    MG011357    ATG84759.1    ATG84869.1    KJ477102    AHL18094.1    KU851859    AMQ49018.1    KJ650295    KJ650296    KJ650297    KT156561    AHX00714.1    AHX00724.1    AHX00734.1    AKM76242.1    KP202238    AJO62195.1    KP202245    AJO62202.1    KP202249    AJO62206.1    KP202242    AJO62199.1    KP202239    AJO62196.1    KP202240    AJO62197.1    KP202244    AJO62201.1    KP202246    AJO62203.1    KP202248    AJO62205.1    KP202247    AJO62204.1    KP202243    AJO62200.1    KT275307    AKQ21067.1    MF741836    ASY99909.1    JX869059    AFS88939.1    KP202241    AJO62198.1    MH310912    AXN92263.1    KX154687    MG011354    ANF29198.1    ATG84836.1    MF598656    ASU90607.1    KT624248    AMD02849.1    MH371127    AXG21646.1    MK462250    QBF80535.1    KJ156869    MH734114    MH734115    AHI48531.1    AXP07348.1    AXP07358.1    MK564474    MK564475    QBM11739.1    QBM11751.1    KC667074    AGG22545.1    KF186564    KF186566    KF186567    KF186565    KF192507    KF600613    KF600622    KF600623    KF600627    KF600628    KF600630    KF600632    KF600634    KF600636    KF600643    KF600645    KF600647    KF600651    KF600652    KF745068    KF961221    KF961222    KJ156866    KJ156874    KJ156881    KJ156910    KJ156934    KJ156944    KJ156949    KJ156952    KJ156916    KJ156942    KJ156872    KJ156873    KJ156876    KJ156901    KJ156905    KJ156911    KJ156939    KJ156865    KJ156907    KJ156915    KJ156927    KJ650098    KJ573793    KJ713295    KJ713296    KJ713297    KJ713298    KJ713299    KJ829365    KM015348    KM027255    KM027256    KM027257    KM027258    KM027259    KM027260    KM027261    KP209306    KP209307    KP209308    KP209309    KP209311    KP209312    KP209313    KP223131    KJ361499    KJ361500    KJ361502    KJ361503    KM210277    KM210278    KP719927    KP719928    KP719929    KP719930    KP719931    KP719932    KP719933    KR011263    KR011264    KR011265    KR011266    KT029139    KT156560    KT326819    KT368827    KT368828    KT368843    KT368849    KT368850    KT368851    KT368852    KT368854    KT368855    KT368856    KT368857    KT368866    KT368867    KT368872    KT368875    KT368878    KT368880    KT368881    KT368882    KT368883    KT368884    KT368885    KT368886    KT368887    KT368890    KT877350    KT877351    KU242423    KU242424    KT806055    KT861627    KT861628    KU740200    KX108937    KX108938    KX108939    KX108940    KX108941    KX108942    KX108944    KY673148    KY688119    KY706245    KY706246    KY706247    KY581684    KY581685    KY581686    KY581687    KY581688    KY581689    KY581690    KY581691    KY581692    KY581693    KY581694    KY581695    KY581697    KY581698    KY581699    KY581700    MF598594    MF598595    MF598603    MF598607    MF598608    MF598609    MF598611    MF598613    MF598614    MF598615    MF598616    MF598619    MF598621    MF598622    MF598624    MF598632    MF598635    MF598636    MF598639    MF598641    MF598645    MF598647    MF598654    MF598658    MF598663    MF598664    MF598665    MF598666    MF598667    MF598670    MF598672    MF598674    MF598675    MF598679    MF598681    MF598686    MF598687    MF598694    MF598695    MF598696    MF598697    MF598698    MF598712    MG923465    MK052676    MK039552    MK039553    MK357908    MK357909    MK462253    MK462254    MK462255    MH259485    MH259486    AGN70932.1    AGN70954.1    AGN70965.1    AGN70976.1    AGN72642.1    AGV08393.1    AGV08423.1    AGV08429.1    AGV08447.1    AGV08458.1    AGV08470.1    AGV08483.1    AGV08495.1    AGV08508.1    AGV08527.1    AGV08549.1    AGV08561.1    AGV08576.1    AGV08587.1    AHB33329.1    AHC74091.1    AHC74101.1    AHI48520.1    AHI48542.1    AHI48553.1    AHI48564.1    AHI48575.1    AHI48586.1    AHI48597.1    AHI48608.1    AHI48619.1    AHI48629.1    AHI48655.1    AHI48665.1    AHI48675.1    AHI48685.1    AHI48695.1    AHI48705.1    AHI48714.1    AHI48815.1    AHI48821.1    AHI48827.1    AHI48834.1    AHX71949.1    AHY04437.1    AHY22527.1    AHY22537.1    AHY22547.1    AHY22557.1    AHY22567.1    AHZ64060.1    AID50421.1    AIL23915.1    AIL23926.1    AIL23937.1    AIL23948.1    AIL23959.1    AIL23970.1    AIL23981.1    AIY60521.1    AIY60531.1    AIY60541.1    AIY60551.1    AIY60571.1    AIY60581.1    AIY60591.1    AIZ48763.1    AIZ74410.1    AIZ74441.1    AIZ74453.1    AJD81443.1    AJD81454.1    AJG44061.1    AJG44072.1    AJG44083.1    AJG44094.1    AJG44105.1    AJG44116.1    AJG44127.1    AKI29258.1    AKI29268.1    AKI29278.1    AKI29287.1    AKL59404.1    AKM76232.1    AKS48065.1    ALA49377.1    ALA49388.1    ALA49553.1    ALA49619.1    ALA49630.1    ALA49641.1    ALA49652.1    ALA49674.1    ALA49685.1    ALA49696.1    ALA49707.1    ALA49806.1    ALA49817.1    ALA49872.1    ALA49905.1    ALA49938.1    ALA49960.1    ALA49971.1    ALA49982.1    ALA49993.1    ALA50004.1    ALA50015.1    ALA50026.1    ALA50037.1    ALA50070.1    ALL26399.1    ALL26412.1    ALT66873.1    ALT66883.1    ALW82756.1    ALX27235.1    ALX27246.1    AMO03404.1    ANI69827.1    ANI69838.1    ANI69849.1    ANI69860.1    ANI69871.1    ANI69881.1    ANI69903.1    AQZ41288.1    AQZ41324.1    ASJ26613.1    ASJ26621.1    ASJ26629.1    ASU45699.1    ASU45711.1    ASU45722.1    ASU45733.1    ASU45744.1    ASU45755.1    ASU45766.1    ASU45777.1    ASU45788.1    ASU45799.1    ASU45810.1    ASU45821.1    ASU45843.1    ASU45854.1    ASU45865.1    ASU45876.1    ASU89924.1    ASU89936.1    ASU90024.1    ASU90068.1    ASU90079.1    ASU90090.1    ASU90112.1    ASU90134.1    ASU90145.1    ASU90156.1    ASU90167.1    ASU90200.1    ASU90222.1    ASU90233.1    ASU90255.1    ASU90343.1    ASU90376.1    ASU90387.1    ASU90420.1    ASU90442.1    ASU90486.1    ASU90508.1    ASU90585.1    ASU90629.1    ASU90684.1    ASU90695.1    ASU90706.1    ASU90717.1    ASU90728.1    ASU90761.1    ASU90783.1    ASU90805.1    ASU90816.1    ASU90860.1    ASU90882.1    ASU90937.1    ASU90948.1    ASU91024.1    ASU91035.1    ASU91046.1    ASU91057.1    ASU91068.1    ASU91222.1    AVN89283.1    AYP10301.1    AYV64552.1    AYV64563.1    QAT98900.1    QAT98911.1    QBF80568.1    QBF80579.1    QBF80590.1    QCI31472.1    QCI31483.1    KC164505    KT026453    KT026455    AKK52585.1    AKK52605.1    KT368873    MF598631    ALA49883.1    ASU90332.1    MG596802    AUM60017.1    KX108943    ANI69892.1    KF933384    AHC74084.1    MG011342    ATG84704.1    KX154691    ANF29242.1    MG011348    MG011349    MG011350    ATG84770.1    ATG84781.1    ATG84792.1    KY673149    AQZ41299.1    KT368825    ALA49355.1    KX154692    ANF29253.1    KP209310    KY581696    AIY60561.1    ASU45832.1    MF598620    ASU90211.1    MK462256    QBF80601.1    KU233362    MF741833    ALT66805.1    ASY99876.1    MH432120    AXG21668.1    MG923466    MG923467    MG923468    AVN89294.1    AVN89305.1    AVN89316.1    KT006149    KT026454    KT026456    KT036372    KT036373    KT036374    KT275306    KT275308    KT368826    KT368833    KT368834    KT368835    KT368836    KT368837    KT368838    KT368839    KT368840    KT368841    KT368842    KT368846    KT368847    KT368848    KT368858    KT368859    KT368860    KT368861    KT368862    KT368863    KT368864    KT368865    KT368868    KT368869    KT368870    KT368871    KT368876    KT368877    KT368879    KT368888    KT374050    KT374051    KT374052    KT374053    KT374054    KT374055    KT374056    KT374057    KT225476    KT868865    KT868866    KT868867    KT868868    KT868869    KT868871    KT868872    KT868873    KT868874    KT868875    KT868876    KT868877    KT002192    KU233363    KU233364    KT806044    KT806045    KT806046    KT806047    KT806048    KT806049    KT806050    KT806051    KT806053    KT806054    KT624249    KT624250    KT624251    KU308549    KU851860    KU851861    KU851862    KU851863    KU851864    KX034093    KX034094    KX034095    KX034096    KX034097    KX034098    KX034099    KX034100    KX154684    KX154685    KX154686    KX154688    KX154690    KX154693    KX108945    KX108946    KY688118    KY688120    KY688121    KY688122    KY688123    KY688124    MF598597    MF598602    MF598604    MF598606    MF598612    MF598617    MF598618    MF598625    MF598627    MF598633    MF598637    MF598644    MF598646    MF598648    MF598652    MF598657    MF598661    MF598662    MF598668    MF598669    MF598676    MF598677    MF598680    MF598682    MF598684    MF598685    MF598688    MF598691    MF598692    MF598693    MF741837    MF741825    MF741826    MF741828    MF741829    MF741830    MF741831    MF741834    MF741835    MG011340    MG011341    MG011343    MG011344    MG011346    MG011351    MG011352    MG011353    MG011355    MG011358    MG011359    MG011360    MG011361    MG011362    MG366881    MG366882    MG366883    MG912595    MG912596    MG912597    MG912598    MG912600    MG912601    MG912602    MG912603    MG912604    MG912605    MG912606    MH306207    MG366483    MG520075    MG520076    MG757593    MG757594    MG757595    MG757596    MG757597    MG757598    MG757600    MG757601    MG757602    MG757603    MG757605    MH310910    MH310911    MG546330    MG546331    MH822886    MH029552    MK129253    MK462244    MK462248    MK462249    MK462251    MK462252    MK796425    MN365232    MN365233    AKJ80140.1    AKK52595.1    AKK52615.1    AKL80596.1    AKL80607.1    AKL80618.1    AKQ21058.1    AKQ21076.1    ALA49366.1    ALA49443.1    ALA49454.1    ALA49465.1    ALA49476.1    ALA49487.1    ALA49498.1    ALA49509.1    ALA49520.1    ALA49531.1    ALA49542.1    ALA49586.1    ALA49597.1    ALA49608.1    ALA49718.1    ALA49729.1    ALA49740.1    ALA49751.1    ALA49762.1    ALA49773.1    ALA49784.1    ALA49795.1    ALA49828.1    ALA49839.1    ALA49850.1    ALA49861.1    ALA49916.1    ALA49927.1    ALA49949.1    ALA50048.1    ALB08249.1    ALB08260.1    ALB08270.1    ALB08281.1    ALB08292.1    ALB08303.1    ALB08314.1    ALB08325.1    ALD51907.1    ALK80195.1    ALK80205.1    ALK80215.1    ALK80225.1    ALK80235.1    ALK80254.1    ALK80264.1    ALK80274.1    ALK80284.1    ALK80294.1    ALK80304.1    ALK80314.1    ALM88293.1    ALT66816.1    ALT66827.1    ALW82639.1    ALW82650.1    ALW82661.1    ALW82672.1    ALW82683.1    ALW82694.1    ALW82705.1    ALW82712.1    ALW82734.1    ALW82745.1    AMD02850.1    AMD02851.1    AMD02852.1    AML60273.1    AMQ49029.1    AMQ49040.1    AMQ49051.1    AMQ49062.1    AMQ49073.1    ANC28637.1    ANC28648.1    ANC28659.1    ANC28670.1    ANC28681.1    ANC28692.1    ANC28703.1    ANC28714.1    ANF29165.1    ANF29176.1    ANF29187.1    ANF29209.1    ANF29231.1    ANF29264.1    ANI69914.1    ANI69925.1    AQZ41314.1    AQZ41335.1    AQZ41346.1    AQZ41357.1    AQZ41368.1    AQZ41379.1    ASU89958.1    ASU90013.1    ASU90035.1    ASU90057.1    ASU90123.1    ASU90178.1    ASU90189.1    ASU90266.1    ASU90288.1    ASU90354.1    ASU90398.1    ASU90475.1    ASU90497.1    ASU90519.1    ASU90563.1    ASU90618.1    ASU90662.1    ASU90673.1    ASU90739.1    ASU90750.1    ASU90827.1    ASU90838.1    ASU90871.1    ASU90893.1    ASU90915.1    ASU90926.1    ASU90959.1    ASU90991.1    ASU91002.1    ASU91013.1    ASY99781.1    ASY99792.1    ASY99803.1    ASY99823.1    ASY99834.1    ASY99845.1    ASY99856.1    ASY99887.1    ASY99898.1    ATG84682.1    ATG84693.1    ATG84715.1    ATG84726.1    ATG84748.1    ATG84803.1    ATG84814.1    ATG84825.1    ATG84847.1    ATG84880.1    ATG84891.1    ATG84902.1    ATG84913.1    ATG84924.1    ATY74395.1    ATY74406.1    ATY74417.1    AVK87321.1    AVK87332.1    AVK87343.1    AVK87354.1    AVK87376.1    AVK87387.1    AVK87398.1    AVK87409.1    AVK87420.1    AVK87431.1    AVK87442.1    AWM99585.1    AXN73362.1    AXN73373.1    AXN73384.1    AXN73396.1    AXN73407.1    AXN73418.1    AXN73429.1    AXN73440.1    AXN73451.1    AXN73473.1    AXN73484.1    AXN73495.1    AXN73506.1    AXN73528.1    AXN92241.1    AXN92252.1    AYM48034.1    AYO86702.1    AZK15903.1    QBF80469.1    QBF80513.1    QBF80524.1    QBF80546.1    QBF80557.1    QCQ29078.1    QEJ82218.1    QEJ82229.1    MH310909    AXN92231.1    MF598638    ASU90409.1    KT368824    MH013216    ALA49344.1    AVV61903.1    KF917527    KF958702    KJ556336    AHE78102.1    AHE78113.1    AHN10815.1    MF598643    ASU90464.1    MF598629    MF598642    MF598649    MF598650    MF598651    MF598660    MF598689    ASU90310.1    ASU90453.1    ASU90530.1    ASU90541.1    ASU90552.1    ASU90651.1    ASU90969.1    MH454272    MH395139    AWU59324.1    AXG21657.1    KT368889    ALA50059.1    KX442564    ASL68945.1    KT751244    MF598596    MF598598    MF598599    MF598600    MF598601    MF598605    MF598610    MF598623    MF598626    MF598634    MF598653    MF598655    MF598659    MF598671    MF598673    MF598683    MF598699    MF598700    MF598701    MF598702    MF598703    MF598704    MF598705    MF598706    MF598707    MF598708    MF598709    MF598710    MF598711    MF598713    MF598714    MF598716    MF598717    MF598718    ALR69644.1    ASU89947.1    ASU89969.1    ASU89980.1    ASU89991.1    ASU90002.1    ASU90046.1    ASU90101.1    ASU90244.1    ASU90277.1    ASU90365.1    ASU90574.1    ASU90596.1    ASU90640.1    ASU90772.1    ASU90794.1    ASU90904.1    ASU91079.1    ASU91090.1    ASU91101.1    ASU91112.1    ASU91123.1    ASU91134.1    ASU91145.1    ASU91156.1    ASU91167.1    ASU91178.1    ASU91189.1    ASU91200.1    ASU91211.1    ASU91233.1    ASU91244.1    ASU91265.1    ASU91276.1    ASU91287.1    MF598628    ASU90298.1    KT368844    ALA49564.1    MG366880    MG912607    MG912608    ATY74384.1    AVK87453.1    AVK87464.1    MF598630    MF598640    ASU90321.1    ASU90431.1    MK462247    QBF80502.1    KJ361501    AIZ74435.1    MG912599    AVK87365.1    KX154694    ANF29275.1    MG596803    AUM60027.1    KJ156933    AHI48842.1    MG011345    ATG84737.1    MF598678    ASU90849.1    KX442565    ASL68956.1    KM027262    KT121574    AIL23992.1    AKN24770.1    KJ858500    AIA22866.1    KF600644    AGV08538.1    KJ813439    AHZ58504.1    KT121572    KT121573    KT121575    KT121576    KT121577    KT121578    KT121579    KT121580    KT121581    AKN24752.1    AKN24761.1    AKN24779.1    AKN24788.1    AKN24797.1    AKN24806.1    AKN24815.1    AKN24824.1    AKN24833.1    KT368853    ALA49663.1    KT368845    ALA49575.1    KU710264    KU710265    AMQ48996.1    AMQ49007.1    MG011356    ATG84858.1    KC776174    KJ614529    AGH58721.1    AHY21472.1    KX154689    MG757604    MK280984    ANF29220.1    AXN73517.1    AZU90734.1    MK462243    MK462245    MK462246    QBF80458.1    QBF80480.1    QBF80491.1    KT868870    ALK80245.1    KT806052    ALW82723.1   
Proteomes
UP000101546    UP000095937    UP000124656    UP000145931    UP000124793    UP000139687    + More
UP000159414    UP000172503    UP000163035    UP000202992    UP000166519    UP000110818    UP000117128    UP000124558    UP000157628    UP000112279    UP000096442    UP000160415    UP000096281    UP000096629    UP000096875    UP000099376    UP000100765    UP000101567    UP000101873    UP000102018    UP000102098    UP000104003    UP000104075    UP000104220    UP000104540    UP000105272    UP000105499    UP000108647    UP000109767    UP000110604    UP000110817    UP000112171    UP000112550    UP000112676    UP000113143    UP000113762    UP000114773    UP000115369    UP000115754    UP000116785    UP000117213    UP000117251    UP000118636    UP000118772    UP000119765    UP000120083    UP000120625    UP000121965    UP000123963    UP000124216    UP000125198    UP000125629    UP000127508    UP000127946    UP000128936    UP000129301    UP000130711    UP000131416    UP000134122    UP000134703    UP000136645    UP000136957    UP000137287    UP000139500    UP000140819    UP000142709    UP000142730    UP000143263    UP000144449    UP000144516    UP000144709    UP000145741    UP000147538    UP000148100    UP000148810    UP000151733    UP000152218    UP000152659    UP000153269    UP000155319    UP000156579    UP000157238    UP000157492    UP000158466    UP000159028    UP000159190    UP000159793    UP000159930    UP000160534    UP000161450    UP000161565    UP000161712    UP000163895    UP000165587    UP000165701    UP000166654    UP000167295    UP000167954    UP000170030    UP000171516    UP000171868    UP000174054    UP000174176    UP000174530    UP000174558    UP000175153    UP000180346    UP000139997    UP000095864    UP000180347    UP000119223    UP000131256    UP000130850    UP000097149    UP000098933    UP000102966    UP000103178    UP000105311    UP000106595    UP000108564    UP000109122    UP000109494    UP000109666    UP000110836    UP000112022    UP000112306    UP000113235    UP000113724    UP000114746    UP000115322    UP000118563    UP000119183    UP000120697    UP000122049    UP000122810    UP000126763    UP000128076    UP000128184    UP000128186    UP000128651    UP000128896    UP000129370    UP000129433    UP000140611    UP000142239    UP000143877    UP000144056    UP000144472    UP000144909    UP000145271    UP000146591    UP000146604    UP000147342    UP000149043    UP000149108    UP000149341    UP000149520    UP000151455    UP000151795    UP000151999    UP000155291    UP000156767    UP000159306    UP000162302    UP000167218    UP000168352    UP000171389    UP000171892    UP000172734    UP000173175    UP000173448    UP000180348    UP000138672    UP000120438    UP000135014    UP000148657    UP000158935    UP000135646    UP000098431    UP000169572    UP000139800    UP000144938    UP000140498    UP000166310    UP000108030    UP000114620    UP000118244    UP000123861    UP000133615    UP000135429    UP000137346    UP000146144    UP000167575    UP000153346    UP000126955    UP000108469    UP000180345    UP000170921   
PDB
3KYH     E-value=1.45347,     Score=70

Ontologies

Subcellular Location

From MSLVP
Capsid
From Uniprot
Host nucleus   Mainly localized in the host nucleus.   With evidence from 1 publications.
Host nucleolus   Mainly localized in the host nucleus.   With evidence from 1 publications.
Host cytoplasm   Mainly localized in the host nucleus.   With evidence from 1 publications.

Topology

Length:
223
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00122
Exp number, first 60 AAs:
0.00018
Total prob of N-in:
0.08517
outside
1  -  223
 
 

Population Genetic Test Statistics

Genomic alignment in the CDS region

 
 

Multiple alignment of Orthologues

 
 

Gene Tree

 
 

Orthologous in Strains

Strain Availability Status Gene
CHINA_HS_2019_MN908947    
CHINA_AVIAN_2008_NC_016995    
CHINA_AVIAN_2007_NC_016991    
CHINA_MURINE_2015_NC_035191    
CANADA_AVIAN_2007_NC_010800    
USA_PIG_2000_NC_038861    
CHINA_AVIAN_2007_NC_011549    
ITALY_PIG_2009_NC_028806    
GERMANY_PIG_2012_LT545990    
CHINA_AVIAN_2007_NC_016992    
CHINA_BAT_2005_NC_009657    
CANADA_HS_2003_NC_004718    
CHINA_BAT_2014_NC_030886    
CHINA_BAT_2005_NC_018871    
USA_MURINE_2009_NC_012936    
CHINA_RABBIT_2006_NC_017083    
UK_PIG_2000_NC_003436    
ROMANIA_PIG_2015_LT898435    
ROMANIA_PIG_2015_LT898436    
GERMANY_PIG_2015_LT898444    
GERMANY_PIG_2015_LT898414    
GERMANY_PIG_2015_LT898439    
GERMANY_PIG_2015_LT898413    
GERMANY_PIG_2015_LT898412    
GERMANY_PIG_2015_LT898411    
GERMANY_PIG_2015_LT898416    
GERMANY_PIG_2015_LT898443    
GERMANY_PIG_2015_LT898420    
GERMANY_PIG_2015_LT898408    
GERMANY_PIG_2015_LT898423    
GERMANY_PIG_2015_LT898432    
GERMANY_PIG_2015_LT898409    
GERMANY_PIG_2015_LT898425    
GERMANY_PIG_2015_LT898446    
GERMANY_PIG_2014_LT898438    
GERMANY_PIG_2014_LT898440    
GERMANY_PIG_2014_LT900501    
GERMANY_PIG_2014_LT898427    
GERMANY_PIG_2014_LT898415    
GERMANY_PIG_2014_LT898421    
GERMANY_PIG_2014_LT898431    
GERMANY_PIG_2014_LT898410    
GERMANY_PIG_2014_LT900498    
GERMANY_PIG_2014_LT898430    
GERMANY_PIG_1978_LT897799    
GERMANY_PIG_2014_LT898447    
GERMANY_PIG_2014_LT898426    
GERMANY_PIG_2014_LT898417    
GERMANY_PIG_2014_LT900500    
GERMANY_PIG_2014_LT898445    
AUSTRIA_PIG_2015_LT898418    
AUSTRIA_PIG_2015_LT898441    
AUSTRIA_PIG_2015_LT898433    
AUSTRIA_PIG_2015_LT900502    
GERMANY_PIG_2015_LT900499    
BELGIUM_PIG_1980_LT906620    
BELGIUM_PIG_1977_LT905450    
SWITZERLAND_PIG_2003_LT905451    
BELGIUM_PIG_1978_LT906581    
UK_PIG_1987_LT906582    
CHINA_PIG_2009_NC_016990    
CHINA_PIG_2010_NC_039208    
KENYA_BAT_2010_KY073745    
KENYA_BAT_2010_NC_032107    
CHINA_AVIAN_2007_NC_016994    
EUROPE_MURINE_2004_AY700211    
CHINA_AVIAN_2007_NC_011550    
USA_MURINE_1997_NC_001846    
USA_MURINE_1998_NC_023760    
MID_EAST_HS_2012_NC_019843    
CHINA_AVIAN_2007_NC_016993    
CHINA_MURINE_2013_NC_032730    
USA_HS_2004_AY585228    
NETHERLAND_HS_2004_NC_005831    
CHINA_HS_2004_NC_006577    
EUROPE_HS_2000_NC_002645    
NETHERLAND_FERRET_2010_NC_030292    
JAPAN_FERRET_2013_LC119077    
USA_FELINE_2005_NC_002306    
CHINA_MURINE_2011_NC_034972    
CHINA_AVIAN_2007_NC_016996    
ARABIA_CAMEL_2015_NC_028752    
CHINA_AVIAN_2007_NC_011547    
CHINA_BAT_2012_NC_028824    
CHINA_BAT_2013_NC_028814    
CHINA_BAT_2013_NC_028833    
CHINA_BAT_2011_NC_028811    
USA_BOVIN_2001_NC_003045    
CHINA_MURINE_2012_NC_026011    
GERMANY_ERINACEINAE_2012_NC_022643 Protein
YP_008719936.1
GERMANY_ERINACEINAE_2012_NC_039207 Protein
YP_009513014.1
UK_HS_2012_NC_038294    
AMERICA_WHALE_2007_NC_010646    
CHINA_BAT_2013_NC_025217    
UGANDA_BAT_2013_NC_034440    
CHINA_BAT_2006_NC_009021    
CHINA_BAT_2008_NC_010438    
CHINA_BAT_2006_NC_009020    
CHINA_BAT_2006_NC_009019    
CHINA_BAT_2006_NC_009988    
USA_BAT_2006_NC_022103    
BULGARIA_BAT_2008_NC_014470    
CHINA_BAT_2008_NC_010437    
USA_AVIAN_2004_NC_001451    
Copyright@ 2018-2023    Any Comments and suggestions mail to:  zhuzl@cqu.edu.cn, mg@cau.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号

In processing...
Login to ASFVdb
Email
Password
Please go to Regist if without an account.
If you have forgotten your password, you can once again Regist an account with a registed or new email.
Change my password
Enter new password
Reenter new password
Regist an account of ASFVdb
It is required that you provide your institutional e-mail address (with edu or org in the domain) as confirmation of your affiliation.
Enter email
Reenter email
First Name
Last Name
Institution
You can directly go to if with an account.
Registraion Success
Your password has been sent to your email.
Please check it and login later.
Welcome to use ASFVdb.