Strain | Gene | Type | Sub Loc | Uniprot Sublocation | Topology | |
---|---|---|---|---|---|---|
Pgo_410543 | QHD43415.1 | ORF1 | Capsid |
Host membrane |
outside 1 - 2020 TMhelix 2021 - 2043 inside 2044 - 2087 TMhelix 2088 - 2110 outside 2111 - 2129 TMhelix 2130 - 2152 inside 2153 - 2445 TMhelix 2446 - 2468 outside 2469 - 2721 TMhelix 2722 - 2744 inside 2745 - 2756 TMhelix 2757 - 2779 outside 2780 - 3160 TMhelix 3161 - 3178 inside 3179 - 3184 TMhelix 3185 - 3207 outside 3208 - 3221 TMhelix 3222 - 3244 inside 3245 - 3264 TMhelix 3265 - 3284 outside 3285 - 3315 TMhelix 3316 - 3338 inside 3339 - 3357 TMhelix 3358 - 3380 outside 3381 - 6475 |
|
Pgo_410543 | QHD43416.1 | S | Host nucleus > host nucleolus. Host cytoplasm. Secreted. |
Host cell membrane Accumulates in the endoplasmic reticulum-Golgi intermediate compartment, where it participates in virus particle assembly. Some S oligomers are transported to the host plasma membrane, where they may mediate cell-cell fusion. referred by 1 publications |
outside 1 - 1059 TMhelix 1060 - 1082 inside 1083 - 1119 |
|
Pgo_410543 | QHD43417.1 | Host nucleus > host nucleolus. Host cytoplasm. Secreted. |
|
outside 1 - 33 TMhelix 34 - 56 inside 57 - 68 TMhelix 69 - 91 outside 92 - 248 |
||
Pgo_410543 | QHD43418.1 | E | Host nucleus. Host cytoplasm. |
Host Golgi apparatus membrane The cytoplasmic tail functions as a Golgi complex-targeting signal. referred by 1 publications |
inside 1 - 11 TMhelix 12 - 34 outside 35 - 75 |
|
Pgo_410543 | QHD43419.1 | M | Host nucleus. Host cytoplasm. |
|
outside 1 - 66 |
|
Pgo_410543 | QHD43420.1 | Host nucleus. Host cytoplasm. |
|
outside 1 - 61 |
||
Pgo_410543 | QHD43421.1 | Host nucleus > host nucleolus. Host cytoplasm. Secreted. |
|
outside 1 - 90 |
||
Pgo_410543 | QHD43422.1 | Host nucleus. Host cytoplasm. |
|
outside 1 - 94 |
||
Pgo_410543 | QHD43423.2 | N | Host nucleus > host nucleolus. Host cytoplasm. Secreted. |
Host Golgi apparatus Located inside the virion, complexed with the viral RNA. Probably associates with ER-derived membranes where it participates in viral RNA synthesis and virus budding. referred by 1 publications |
outside 1 - 417 |
|
Pgo_410543 | QHI42199.1 | Single-Pass Membrane |
|
outside 1 - 38 |
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