Strain | Gene | Type | Sub Loc | Uniprot Sublocation | Topology | |
---|---|---|---|---|---|---|
Pgo_410721 | QHD43415.1 | ORF1 | Capsid |
Host membrane |
outside 1 - 2223 TMhelix 2224 - 2246 inside 2247 - 2329 TMhelix 2330 - 2352 outside 2353 - 2356 TMhelix 2357 - 2379 inside 2380 - 2765 TMhelix 2766 - 2788 outside 2789 - 3035 TMhelix 3036 - 3058 inside 3059 - 3069 TMhelix 3070 - 3104 outside 3105 - 3118 TMhelix 3119 - 3141 inside 3142 - 3573 TMhelix 3574 - 3593 outside 3594 - 3602 TMhelix 3603 - 3622 inside 3623 - 3628 TMhelix 3629 - 3651 outside 3652 - 3674 TMhelix 3675 - 3694 inside 3695 - 3713 TMhelix 3714 - 3733 outside 3734 - 3742 TMhelix 3743 - 3765 inside 3766 - 3771 TMhelix 3772 - 3794 outside 3795 - 7090 |
|
Pgo_410721 | QHD43416.1 | S | Host nucleus > host nucleolus. Host cytoplasm. Secreted. |
Host cell membrane Accumulates in the endoplasmic reticulum-Golgi intermediate compartment, where it participates in virus particle assembly. Some S oligomers are transported to the host plasma membrane, where they may mediate cell-cell fusion. referred by 1 publications |
outside 1 - 1204 TMhelix 1205 - 1227 inside 1228 - 1264 |
|
Pgo_410721 | QHD43417.1 | Host nucleus > host nucleolus. Host cytoplasm. Secreted. |
|
outside 1 - 33 TMhelix 34 - 56 inside 57 - 76 TMhelix 77 - 99 outside 100 - 102 TMhelix 103 - 125 inside 126 - 275 |
||
Pgo_410721 | QHD43418.1 | E | Host nucleus. Host cytoplasm. |
Host Golgi apparatus membrane The cytoplasmic tail functions as a Golgi complex-targeting signal. referred by 1 publications |
inside 1 - 11 TMhelix 12 - 34 outside 35 - 75 |
|
Pgo_410721 | QHD43419.1 | M | Host nucleus. Host cytoplasm. |
|
outside 1 - 19 TMhelix 20 - 39 inside 40 - 50 TMhelix 51 - 73 outside 74 - 77 TMhelix 78 - 100 inside 101 - 222 |
|
Pgo_410721 | QHD43420.1 | Host nucleus. Host cytoplasm. |
|
outside 1 - 61 |
||
Pgo_410721 | QHD43421.1 | Host nucleus > host nucleolus. Host cytoplasm. Secreted. |
|
outside 1 - 96 TMhelix 97 - 116 inside 117 - 121 |
||
Pgo_410721 | QHD43422.1 | Host nucleus. Host cytoplasm. |
|
outside 1 - 121 |
||
Pgo_410721 | QHD43423.2 | N | Host nucleus > host nucleolus. Host cytoplasm. Secreted. |
Host Golgi apparatus Located inside the virion, complexed with the viral RNA. Probably associates with ER-derived membranes where it participates in viral RNA synthesis and virus budding. referred by 1 publications |
outside 1 - 419 |
|
Pgo_410721 | QHI42199.1 | Single-Pass Membrane |
|
outside 1 - 38 |
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