Strain

GERMANY_PIG_2015_LT898425 (Region: Germany;  Strain: Porcine epidemic diarrhea virus isolate PEDV_GER_L00998-K06_15-03_2015 genome assembly, complete genome: monopartite.;  Date: 2015)

Gene

nucleocapsid protein

Description

Annotated in NCBI,  nucleocapsid protein

Location

LT898425(+):26370-27695

GenBank Accession

SNQ27979.1

Full name

Nucleoprotein      

CDS

ATGGCTTCTGTCAGTTTTCAGGATCGTGGCCGCAAACGGGTGCCATTATCCCTCTATGCCCCTCTTAGGGTTACTAATGACAAACCCCTTTCTAAGGTACTTGCAAATAATGCTGTACCCACTAATAAAGGAAATAAGGACCAGCAAATTGGATACTGGAATGAGCAAATTCGCTGGCGCATGCGCCGTGGTGAGCGAATTGAACAACCTTCCAATTGGCATTTCTACTACCTCGGAACAGGACCTCACGCCGACCTCCGCTATAGGACTCGTACTGAGGGTGTTTTCTGGGTTGCTAAAGAAGGCGCAAAGACTGAACCCACTAACCTGGGTGTCAGAAAGGCGTCTGAAAAGCCAATCATTCCAAATTTCTCTCAACAGCTTCCCAGCGTAGTTGAGATTGTTGAACCTAACACACCTCCTACTTCACGTGCAAATTCACGTAGCAGGAGTCGTGGTAATGGCAACAACAGGTCCAGATCTCCAAGTAACAACAGAGGCAATAACCAGTCCCGCGGTAATTCACAGAATCGTGGAAATAACCAGGGTCGTGGAGCTTCTCAGAACAGAGGAGGCAATAATAATAACAATAACAAGTCTCGTAACCAGTCCAAGAACAGAAACCAGTCAAATGACCGTGGTGGTGTAACATCACGCGATGATCTGGTGGCTGCTGTCAAGGATGCCCTTAAATCTTTGGGCATTGGCGAAAACCCTGACAAGCTTAAGCAACAGCAGAAGCCCAAACAGGAAAGGTCTGACAGCAGCGGCAAAAATACACCTAAGAAGAACAAATCCAGAGCCACTTCGAAAGAACGTGACCTTAAAGACATCCCAGAGTGGAGGAGAATTCCCAAGGGCGAAAATAGCGTAGCAGCTTGCTTCGGACCCAGGGGAGGCTTCAAAAATTTTGGAGATGCGGAATTTGTCGAAAAAGGTGTTGATGCCTCAGGCTATGCCCAGATCGCCAGTTTAGCACCAAATGTTGCAGCATTGCTCTTTGGTGGTAATGTGGCTGTTCGTGAGCTAGCGGACTCTTACGAGATTACATACAATTATGTAATGACTGTGCCAAAGTCTGATCCAAATGTAGAGCTTCTTGTTTCACAGGTGGATGCATTTAAAACTGGGAATGCAAAACCCCAGAGAAAGAAGGAAAAGAAGAACAAGCGTGAAACCACGCAGCAGCTGAATGAAGATGCCATCTACGATGATGTGGGTTTGCCATCTGATTCGACTCATGCCAATTTGGAATGGGACACAGCTGTTGACGGTGGTGACACGGCCGTTGAAATTATCAACGAGATCTTCGATACAGGAAATTAA

Protein

MASVSFQDRGRKRVPLSLYAPLRVTNDKPLSKVLANNAVPTNKGNKDQQIGYWNEQIRWRMRRGERIEQPSNWHFYYLGTGPHADLRYRTRTEGVFWVAKEGAKTEPTNLGVRKASEKPIIPNFSQQLPSVVEIVEPNTPPTSRANSRSRSRGNGNNRSRSPSNNRGNNQSRGNSQNRGNNQGRGASQNRGGNNNNNNKSRNQSKNRNQSNDRGGVTSRDDLVAAVKDALKSLGIGENPDKLKQQQKPKQERSDSSGKNTPKKNKSRATSKERDLKDIPEWRRIPKGENSVAACFGPRGGFKNFGDAEFVEKGVDASGYAQIASLAPNVAALLFGGNVAVRELADSYEITYNYVMTVPKSDPNVELLVSQVDAFKTGNAKPQRKKEKKNKRETTQQLNEDAIYDDVGLPSDSTHANLEWDTAVDGGDTAVEIINEIFDTGN

Function

Packages the positive strand viral genome RNA into a helical ribonucleocapsid (RNP) and plays a fundamental role during virion assembly through its interactions with the viral genome and membrane protein M. Plays an important role in enhancing the efficiency of subgenomic viral RNA transcription as well as viral replication.

Subunit

Homooligomer. Both monomeric and oligomeric forms interact with RNA. Interacts with protein M. Interacts with NSP3; this interaction serves to tether the genome to the newly translated replicase-transcriptase complex at a very early stage of infection.

Uniprot

A0A168SP43   A0A238TM58   A0A3G2LYG4   A0A5J6SWI7   A0A238TMY4   A0A3G4RXP3   + More
A0A345YTW0   A0A2P1DXC9   A0A5J6AP69   A0A1U9WZ07   A0A238TQG4   A0A096XAF7   A0A0A8LFI9   A0A0E3TJA8   A0A3Q8TM10   F5CIA0   A0A1S6L952   A0A068JFC5   A0A4P8YSC7   A0A238TMI6   A0A068JFD4   A0A1L3KIW2   A0A1S6QMK2   G8GMX6   X5CR25   A0A2S0S5C2   A0A0U2WPR7   A0A1X9RV73   K0FAU6   A0A075ED93   A0A2I6DZH5   A0A068JFD0   X2F0T5   W8GL04   A0A4D6FU77   A0A5J6AP34   A0A142C7C3   A0A023J7B8   A0A2S0S5A3   A0A3S8TLR7   A0A191TBR6   A0A0B4ZZG8   A0A1L6K604   H9A5G4   A0A238TML0   A0A3S8Z5F8   A0A2S0S5D8   A0A068JF89   A0A4D6GHU4   G8GMX9   A0A075EB78   A0A068JF81   A0A5K1KB31   A0A3S8TLP7   Q692L9   A7LKV4   A0A1X9Q890   A0A5B8YU42   A0A2U9EW67   A0A4V1DXB6   L0H8I5   A0A142C7C6   A0A068JFC0   A0A2U8QNE1   W8GYS6   A0A1B1MR59   A0A2U3TMT9   F5CHU8   A0A0P0TE87   G8GMW7   G8GMX7   A0A068JF77   A0A075ECV7   G8GMW9   K0FBV5   B7UCM9   A0A0C5L1M8   A0A0K1RL77   A0A1X9Q8A0   A0A2P1DXE3   G8GMY4   B7UCM1   A0A3G3C9A3   A0A076L8M5   A0A0C5KQR9   K0FB21   A0A1X9PY47   W8GQE9   A0A5J6SUP1   A0A2S0S5D1   W8GQF3   A0A0S3MSK5   G8GMX4   A0A2Z4ELF9   A0A068JFE5   K0FBV0   H6U5R4   A0A075ED82   A0A068JF91   A0A0U1YGD3  

Pubmed

27103490    25790462    25999551    25694517    30593385    25272273    + More
27880757    24818713    26611909    25279722    24744324    26512689    23151819    29789941    29770590    23469356    23381394    26477934    29879479    22354946    22879620    23929470    24356830    23963154    24129257    24795932    24750580    24960370    24926047    24874682    24954514    24197882    25098383    25217400    26196056    27103712    26841768    27059242    28284624    28534849    29540176    29468451    31364317   

EMBL

KU252649    ANC68211.1    LT898421    LT898431    SNQ27912.1    SNQ27983.1    + More
MG778701    AYN79040.1    MK644602    QFG01698.1    LT898436    LT898435    SNQ28020.1    SNQ28049.1    MH301101    AYU70939.1    MF807952    AXK47362.1    MG837012    AVK78151.1    MH726383    QCQ19928.1    KY111278    AQY61723.1    LT898420    SNQ27953.1    KF760557    KJ526096    AHF20049.1    AJD07370.1    LM645057    CDW77209.1    KR003452    AKC34876.1    MH061340    AZL47220.1    JF700126    KM609213    KT199103    KR153325    KR153326    KX064280    KX981440    KX812523    KX016034    KY007140    MF118913    MH061337    MH061343    MH117940    MK250953    LM645058    MH726369    MH726380    MK409657    MK409658    MK409659    LT898447    AEE38484.1    AJP67460.1    ALP06214.1    AMS37102.1    AMS37109.1    AND76941.1    APH81310.1    AQW35011.1    ARJ54150.1    ATG31104.1    AWA82544.1    AZL47202.1    AZL47238.1    AZP03047.1    AZS27729.1    CDW77217.1    QCQ19844.1    QCQ19910.1    QEE80063.1    QEE80069.1    QEE80075.1    SNQ28092.1    KX550281    AQT33898.1    KF840552    AIE16014.1    MH726372    MH726382    MK138353    MK422160    MK577661    QCQ19862.1    QCQ19922.1    QCT24241.1    QEA72160.1    QEQ76229.1    LT898439    LT900499    SNQ28042.1    SNT95663.1    KF840554    AIE16024.1    KX883635    APG77340.1    KX812524    AQW35017.1    JN173285    JN173286    JN255975    JN255976    AET71259.1    AET71260.1    AEW46025.1    AEW46026.1    KJ196348    AHW40034.1    MF118920    AWA82551.1    KT323980    ALS35478.1    KU558701    KY679907    MH726368    ANY27035.1    ARQ84961.1    QCQ19838.1    JX406143    AFU07544.1    KJ645697    AID57043.1    MF375374    MH061336    AUJ79488.1    AZL47196.1    KF840553    AIE16019.1    KJ020932    AHM88221.1    KF994793    AHK25043.1    MK606369    QCB65310.1    MH726373    QCQ19868.1    KT799997    AMP46775.1    KF761675    KT021227    KT021228    AHG97489.1    ALM09362.1    ALM09368.1    MF118914    MF118917    AWA82545.1    AWA82548.1    MH061341    AZL47226.1    KU982974    ANI85780.1    KM604665    AJD80652.1    KY070587    APR64499.1    JN825712    KF468756    KF994804    KR818833    KU975389    KX066126    KX580953    MF118912    AFC98507.1    AGZ04447.1    AHK25054.1    ALL27312.1    AMR60837.1    APD70938.1    AQK38172.1    AWA82543.1    LT898445    SNQ28074.1    MH056657    AZN28591.1    MF118918    AWA82549.1    KF840542    AIE15964.1    MK140811    MK140812    MK140813    MK140814    QCC26585.1    QCC26592.1    QCC26599.1    QCC26606.1    JN173289    AET71263.1    KJ645643    AID56719.1    KF840539    AIE15949.1    MH726381    QCQ19916.1    MH061338    AZL47208.1    AY653206    AAT75300.1    EU031893    ABS72127.1    KX532180    KX532182    KX532183    ARQ18612.1    ARQ18622.1    ARQ18627.1    MH726377    MH726378    MH726379    MK841495    QCQ19892.1    QCQ19898.1    QCQ19904.1    QED40661.1    MH052687    MG837058    AWM11490.1    AWQ28492.1    MH910099    QCL09024.1    KC196276    AGA94624.1    KT800000    AMP46778.1    KF840551    AIE16009.1    MH052683    AWM11472.1    KF994789    AHK25039.1    KX168410    ANS71068.1    MF118916    MH726406    MH726407    AWA82547.1    QCQ20066.1    QCQ20072.1    JF690780    JN173300    JN173301    JN255985    JN255986    JN255987    JN255988    JX406140    KF840540    KF840545    KF840555    KF840558    KM609208    AEE38483.1    AET71274.1    AET71275.1    AEW46035.1    AEW46036.1    AEW46037.1    AEW46038.1    AFU07541.1    AIE15954.1    AIE15979.1    AIE16029.1    AIE16044.1    AJP67430.1    KT021232    KT021233    ALM09392.1    ALM09398.1    JN173277    JN173278    JN173280    JN173281    JN173282    JN173283    JN173290    JN173291    JN173295    JN255974    JN255982    JN255983    AET71251.1    AET71252.1    AET71254.1    AET71255.1    AET71256.1    AET71257.1    AET71264.1    AET71265.1    AET71269.1    AEW46024.1    AEW46032.1    AEW46033.1    JN173287    JN255977    JN255978    AET71261.1    AEW46027.1    AEW46028.1    KF840538    AIE15944.1    KJ645642    AID56713.1    JN173279    AET71253.1    JX406144    AFU07545.1    FJ473393    ACK77286.1    KM609203    AJP67400.1    KR809885    AKV62623.1    KX532181    ARQ18617.1    MG837011    AVK78145.1    JN173294    JN255984    AET71268.1    AEW46034.1    FJ473389    FJ473390    ACK77278.1    ACK77280.1    MG546687    AYP73630.1    KJ777677    KJ777678    AIJ01345.1    KM609212    AJP67454.1    JX406136    AFU07537.1    KY793536    ARQ03273.1    KF994801    KF840544    KM242131    MH726370    AHK25051.1    AIE15974.1    AIS82616.1    QCQ19850.1    MK644601    QFG01692.1    MF118915    AWA82546.1    KF994806    AHK25056.1    LC063822    BAT33189.1    JN173284    AET71258.1    MH107322    AWV57058.1    KF840557    AIE16039.1    JX406138    JX406139    AFU07539.1    AFU07540.1    JN601055    JQ282909    JQ081277    JQ081278    JQ743650    JX088695    KC210147    KF272920    KF267450    KF468752    KF468753    KF650370    KF650371    KF650372    KF650373    KF650374    KF650375    KF804028    KF452322    KF452323    KF994798    KF994802    KF994808    KJ408801    KJ588062    KJ588063    KJ588064    KJ623926    KJ778615    KJ778616    KJ584361    KJ645635    KJ645636    KJ645638    KJ645640    KJ645641    KJ645645    KJ645647    KJ645650    KJ645651    KJ645653    KJ645656    KJ645657    KJ645658    KJ645659    KJ645661    KJ645662    KJ645664    KJ645665    KJ645666    KJ645668    KJ645672    KJ645674    KJ645676    KJ645677    KJ645678    KJ645679    KJ645680    KJ645681    KJ645684    KJ645686    KJ645687    KJ645688    KJ645689    KJ645691    KJ645693    KJ645694    KJ645699    KJ645703    KJ645704    KJ645705    KJ645706    KJ645707    KJ645708    KJ662670    KF840537    KF840546    KF840547    KF840548    KM052365    KJ184549    KM392224    KM392225    KM392226    KM392227    KM392228    KM392229    KM189367    KJ857426    KM609207    KR265762    KR265764    KR265765    KR265768    KR265770    KR265771    KR265772    KR265773    KR265774    KR265775    KR265776    KR265777    KR265778    KR265779    KR265780    KR265781    KR265782    KR265783    KR265784    KR265785    KR265786    KR265787    KR265789    KR265790    KR265791    KR265792    KR265794    KR265797    KR265799    KR265800    KR265801    KR265802    KR265803    KR265804    KR265805    KR265806    KR265808    KR265809    KR265812    KR265813    KR265814    KR265816    KR265817    KR265819    KR265822    KR265823    KR265825    KR265827    KR265828    KR265829    KR265830    KR265832    KR265833    KR265834    KR265840    KR265841    KR265842    KR265844    KM975736    KM975740    KR078299    KR873431    KR873432    KR873433    KR873434    KR873435    KR873436    KR873437    KR270436    KP641662    KT006150    KU569509    KU982966    KU982971    KU982972    KU982973    KU982976    KU982977    KU982978    KU982979    KU982981    KU558702    KU893861    KU893869    KU893870    KU893871    KU893872    KU893873    KX580958    KX683006    KY499261    KY499262    KY929405    KY929406    KY825240    KY825241    KY825242    KY825243    KY619782    KY619786    KY619787    KY619788    KY619789    KY619791    KY619793    KY619794    KY619795    KY619796    KY619797    KY619799    KY619800    KY619801    KY619802    KY619803    KY619804    KY619805    KY619807    KY619808    KY619809    KY619811    KY619812    KY619813    KY619814    KY619815    KY619816    KY619818    MG334554    MG334555    MH004420    MH006957    MH006963    MH006965    MH013465    MH013466    MH052681    MH052684    MH052685    MH107321    MH056658    LC022792    LC063810    LC063811    LC063812    LC063814    LC063815    LC063816    LC063817    LC063818    LC063820    LC063821    LC063823    LC063824    LC063825    LC063827    LC063828    LC063829    LC063830    LC063831    LC063832    LC063833    LC063834    LC063835    LC063837    LC063838    LC063839    LC063840    LC063844    LC063845    LC063846    MK288006    MH726362    MH726371    MH726375    MK559454    MK559455    MK559456    MN037494    AEZ68021.1    AFB77238.1    AFD98079.1    AFD98080.1    AFK77922.1    AFP36393.1    AGG55754.1    AGO58928.1    AGS12453.1    AGY31026.1    AGY31032.1    AHA38122.1    AHA38129.1    AHA38136.1    AHA38143.1    AHA38150.1    AHA38157.1    AHA38164.1    AHC03506.1    AHC03512.1    AHK25048.1    AHK25052.1    AHK25058.1    AHN60056.1    AHX58674.1    AHX58680.1    AHX58686.1    AHY04233.1    AHZ94885.1    AHZ94891.1    AIA61018.1    AID56671.1    AID56677.1    AID56689.1    AID56701.1    AID56707.1    AID56731.1    AID56743.1    AID56761.1    AID56767.1    AID56779.1    AID56797.1    AID56803.1    AID56809.1    AID56815.1    AID56827.1    AID56833.1    AID56845.1    AID56851.1    AID56857.1    AID56869.1    AID56893.1    AID56905.1    AID56917.1    AID56923.1    AID56929.1    AID56935.1    AID56941.1    AID56947.1    AID56965.1    AID56977.1    AID56983.1    AID56989.1    AID56995.1    AID57007.1    AID57019.1    AID57025.1    AID57055.1    AID57079.1    AID57085.1    AID57091.1    AID57097.1    AID57103.1    AID57109.1    AID66725.1    AIE15939.1    AIE15984.1    AIE15985.1    AIE15994.1    AIK69679.1    AIM47752.1    AIN52092.1    AIN52098.1    AIN52104.1    AIN52110.1    AIN52116.1    AIN52122.1    AIP84471.1    AJD09549.1    AJP67424.1    AKJ21723.1    AKJ21735.1    AKJ21741.1    AKJ21759.1    AKJ21771.1    AKJ21777.1    AKJ21783.1    AKJ21789.1    AKJ21795.1    AKJ21801.1    AKJ21807.1    AKJ21813.1    AKJ21819.1    AKJ21825.1    AKJ21831.1    AKJ21837.1    AKJ21843.1    AKJ21849.1    AKJ21855.1    AKJ21861.1    AKJ21867.1    AKJ21873.1    AKJ21885.1    AKJ21891.1    AKJ21897.1    AKJ21903.1    AKJ21915.1    AKJ21933.1    AKJ21945.1    AKJ21951.1    AKJ21957.1    AKJ21963.1    AKJ21969.1    AKJ21975.1    AKJ21981.1    AKJ21987.1    AKJ21999.1    AKJ22005.1    AKJ22023.1    AKJ22029.1    AKJ22035.1    AKJ22047.1    AKJ22053.1    AKJ22065.1    AKJ22083.1    AKJ22089.1    AKJ22101.1    AKJ22113.1    AKJ22119.1    AKJ22125.1    AKJ22131.1    AKJ22143.1    AKJ22149.1    AKJ22155.1    AKJ22179.1    AKJ22185.1    AKJ22191.1    AKJ22203.1    AKP80600.1    AKP80628.1    AKR05182.1    AKS50226.1    AKS50231.1    AKS50236.1    AKS50242.1    AKS50248.1    AKS50253.1    AKS50258.1    ALL74067.1    ALM31942.1    ALM55427.1    AMC39588.1    ANI85732.1    ANI85762.1    ANI85768.1    ANI85774.1    ANI85792.1    ANI85798.1    ANI85804.1    ANI85810.1    ANI85822.1    ANY27041.1    APX42111.1    APX42117.1    APX42123.1    APX42129.1    APX42135.1    APX42141.1    APX42295.1    ARM65488.1    ARM65494.1    ART85703.1    ART85710.1    ASA40095.1    ASA40101.1    ASA40107.1    ASA40113.1    ATJ03637.1    ATJ03641.1    ATJ03642.1    ATJ03643.1    ATJ03644.1    ATJ03646.1    ATJ03648.1    ATJ03649.1    ATJ03650.1    ATJ03651.1    ATJ03652.1    ATJ03654.1    ATJ03655.1    ATJ03656.1    ATJ03657.1    ATJ03658.1    ATJ03659.1    ATJ03660.1    ATJ03662.1    ATJ03663.1    ATJ03664.1    ATJ03666.1    ATJ03667.1    ATJ03668.1    ATJ03669.1    ATJ03670.1    ATJ03671.1    ATJ03673.1    AVI57400.1    AVI57407.1    AVU05400.1    AVU05414.1    AVU05456.1    AVU05470.1    AVU05498.1    AVU05505.1    AWM11460.1    AWM11478.1    AWM11484.1    AWV57052.1    AZN28597.1    BAR92902.1    BAT33117.1    BAT33123.1    BAT33129.1    BAT33141.1    BAT33147.1    BAT33153.1    BAT33159.1    BAT33165.1    BAT33177.1    BAT33183.1    BAT33195.1    BAT33201.1    BAT33207.1    BAT33219.1    BAT33225.1    BAT33231.1    BAT33237.1    BAT33243.1    BAT33249.1    BAT33255.1    BAT33261.1    BAT33267.1    BAT33279.1    BAT33285.1    BAT33291.1    BAT33297.1    BAT33321.1    BAT33327.1    BAT33333.1    QAR17953.1    QCQ19802.1    QCQ19856.1    QCQ19880.1    QDY92473.1    QDY92479.1    QDY92485.1    QED58405.1    KJ645669    KJ645671    KJ645675    KJ645690    KJ645692    KR265821    AID56875.1    AID56887.1    AID56911.1    AID57001.1    AID57013.1    AKJ22077.1    KF840543    AIE15969.1    KJ857412    AJD09535.1   

Proteomes

UP000105572    UP000267609    UP000268721    UP000278990    UP000280596    UP000269867    + More
UP000117616    UP000135702    UP000138211    UP000166734    UP000097091    UP000134050    UP000142872    UP000155002    UP000271135    UP000269355    UP000274124    UP000129155    UP000138881    UP000097949    UP000141838    UP000111801    UP000113720    UP000152961    UP000133157    UP000141524    UP000281631    UP000141497    UP000170972    UP000124473    UP000141943    UP000167996    UP000150601    UP000122204    UP000117357    UP000096940    UP000180355    UP000145028    UP000124268    UP000137135    UP000096231    UP000096250    UP000097201    UP000097739    UP000098101    UP000098326    UP000099262    UP000099939    UP000100263    UP000101279    UP000101715    UP000101883    UP000102377    UP000102422    UP000103144    UP000103187    UP000103230    UP000103525    UP000104212    UP000104329    UP000104629    UP000104743    UP000105228    UP000106279    UP000106554    UP000107079    UP000107890    UP000108853    UP000108901    UP000108998    UP000109462    UP000109784    UP000110005    UP000110085    UP000110553    UP000111048    UP000111596    UP000111853    UP000111997    UP000112445    UP000112678    UP000112725    UP000113629    UP000114176    UP000114423    UP000114426    UP000114584    UP000115696    UP000115820    UP000115913    UP000116623    UP000117024    UP000117465    UP000118055    UP000118621    UP000118902    UP000119410    UP000119498    UP000119763    UP000120045    UP000120106    UP000120197    UP000120281    UP000120529    UP000121150    UP000121581    UP000122106    UP000122852    UP000123046    UP000123112    UP000124209    UP000124555    UP000125425    UP000126216    UP000127334    UP000127953    UP000127975    UP000128202    UP000128363    UP000128879    UP000128894    UP000130438    UP000131950    UP000132225    UP000132509    UP000132713    UP000132921    UP000133030    UP000133398    UP000133657    UP000133992    UP000134226    UP000135037    UP000135153    UP000135502    UP000135609    UP000135713    UP000135840    UP000135878    UP000136286    UP000137076    UP000138117    UP000139036    UP000139218    UP000140002    UP000140886    UP000141930    UP000141975    UP000142054    UP000142467    UP000142735    UP000142994    UP000143145    UP000143266    UP000145713    UP000145872    UP000145986    UP000146202    UP000146856    UP000147164    UP000147626    UP000147669    UP000148016    UP000148048    UP000148065    UP000148839    UP000149058    UP000151206    UP000153081    UP000153092    UP000153127    UP000153418    UP000153562    UP000153741    UP000153753    UP000154143    UP000154723    UP000154811    UP000155842    UP000156035    UP000156412    UP000158257    UP000158401    UP000158853    UP000160123    UP000160238    UP000160819    UP000161341    UP000162314    UP000163006    UP000163267    UP000163543    UP000163624    UP000163819    UP000164459    UP000164654    UP000165932    UP000168320    UP000168469    UP000168944    UP000169024    UP000169265    UP000169811    UP000169922    UP000169926    UP000170794    UP000170945    UP000170995    UP000171222    UP000171879    UP000172207    UP000172961    UP000174684    UP000175330    UP000129574    UP000133192    UP000134395    UP000155212    UP000167803    UP000175484   

Pfam

PF00937   Corona_nucleoca

Interpro

IPR037195   Nucleocapsid_N
IPR042548   ALPHA_CORONA_NCAP
IPR037179   Nucleocapsid_C
IPR001218   Corona_nucleocap

SUPFAM

SSF110304   SSF110304
SSF103068   SSF103068

ProteinModelPortal

A0A168SP43   A0A238TM58   A0A3G2LYG4   A0A5J6SWI7   A0A238TMY4   A0A3G4RXP3   + More
A0A345YTW0   A0A2P1DXC9   A0A5J6AP69   A0A1U9WZ07   A0A238TQG4   A0A096XAF7   A0A0A8LFI9   A0A0E3TJA8   A0A3Q8TM10   F5CIA0   A0A1S6L952   A0A068JFC5   A0A4P8YSC7   A0A238TMI6   A0A068JFD4   A0A1L3KIW2   A0A1S6QMK2   G8GMX6   X5CR25   A0A2S0S5C2   A0A0U2WPR7   A0A1X9RV73   K0FAU6   A0A075ED93   A0A2I6DZH5   A0A068JFD0   X2F0T5   W8GL04   A0A4D6FU77   A0A5J6AP34   A0A142C7C3   A0A023J7B8   A0A2S0S5A3   A0A3S8TLR7   A0A191TBR6   A0A0B4ZZG8   A0A1L6K604   H9A5G4   A0A238TML0   A0A3S8Z5F8   A0A2S0S5D8   A0A068JF89   A0A4D6GHU4   G8GMX9   A0A075EB78   A0A068JF81   A0A5K1KB31   A0A3S8TLP7   Q692L9   A7LKV4   A0A1X9Q890   A0A5B8YU42   A0A2U9EW67   A0A4V1DXB6   L0H8I5   A0A142C7C6   A0A068JFC0   A0A2U8QNE1   W8GYS6   A0A1B1MR59   A0A2U3TMT9   F5CHU8   A0A0P0TE87   G8GMW7   G8GMX7   A0A068JF77   A0A075ECV7   G8GMW9   K0FBV5   B7UCM9   A0A0C5L1M8   A0A0K1RL77   A0A1X9Q8A0   A0A2P1DXE3   G8GMY4   B7UCM1   A0A3G3C9A3   A0A076L8M5   A0A0C5KQR9   K0FB21   A0A1X9PY47   W8GQE9   A0A5J6SUP1   A0A2S0S5D1   W8GQF3   A0A0S3MSK5   G8GMX4   A0A2Z4ELF9   A0A068JFE5   K0FBV0   H6U5R4   A0A075ED82   A0A068JF91   A0A0U1YGD3  

PDB

5N4K     E-value=6.04631e-36,     Score=379