CoVDB Coronavirus Database (v3)   

Gene Clusters

  Distribution in Strains
Cluster540
 Bat_MK472071(QGX41971.1), Bat_MK472069(QGX41965.1), Bat_MK472068(QGX41959.1),
Cluster541
 Bat_NC_030886(YP_009273007.1), Bat_KU762338(AOG30824.1),
Cluster542
 Bat_MF094686(AVM80486.1), Bat_MF094685(AVM80477.1), Bat_MF094688(AVM80502.1), Bat_MF094687(AVM80494.1), Bat_MN611522(QHA24705.1), Bat_NC_028824(YP_009200737.1), Bat_NC_009988(YP_001552238.1), Bat_EF203065(ABQ57218.1), Bat_EF203067(ABQ57234.1), Bat_EF203066(ABQ57226.1), Bat_EF203064(ABQ57210.1), Porcine_MH697599(QBP43302.1), Porcine_MK977618(QEH62671.1), Porcine_MK651076(QDE12099.1), Porcine_MH615810(AXP98441.1), Porcine_MG557844(AVM41572.1), Porcine_MG605091(AXY04094.1), Porcine_MG605090(AXY04085.1), Porcine_MF094684(AVM80468.1), Porcine_MF094683(AVM80459.1), Porcine_MF094682(AVM80450.1), Porcine_MF094681(AVM80441.1), Porcine_MF769444(AVM80778.1), Porcine_MF769443(AVM80769.1), Porcine_MF769442(AVM80760.1), Porcine_MF769432(AVM80670.1), Porcine_MF769426(AVM80616.1), Porcine_MF769441(AVM80751.1), Porcine_MF769427(AVM80625.1), Porcine_MF769416(AVM80526.1), Porcine_MF769437(AVM80715.1), Porcine_MF769428(AVM80634.1), Porcine_MF769438(AVM80724.1), Porcine_MF769433(AVM80679.1), Porcine_MF769434(AVM80688.1), Porcine_MF769435(AVM80697.1), Porcine_MF769417(AVM80535.1), Porcine_MF769429(AVM80643.1), Porcine_MF769436(AVM80706.1), Porcine_MF769420(AVM80562.1), Porcine_MF769421(AVM80571.1), Porcine_MF769418(AVM80544.1), Porcine_MF769422(AVM80580.1), Porcine_MF769431(AVM80661.1), Porcine_MF769419(AVM80553.1), Porcine_MF769425(AVM80607.1), Porcine_MF769439(AVM80733.1), Porcine_MF769430(AVM80652.1), Porcine_MF769424(AVM80598.1), Porcine_MF769423(AVM80589.1), Porcine_MF769440(AVM80742.1), Porcine_MF370205(ATN23891.1), Porcine_MG742313(AWJ64265.1), Porcine_MH539766(QAS69030.1), Porcine_MF167434(ASK51719.1), Bat_KJ473808(AIA62261.1), Porcine_MK994934(QID98953.1), Porcine_MK994935(QID98962.1), Porcine_MK994936(QID98971.1), Porcine_MK994937(QID98978.1), Porcine_MT199591(QJF53979.1), Porcine_MT199592(QJF53988.1),
Cluster543
 Avian_MN611523(QHA24712.1), Avian_MN611525(QHA24726.1), Bat_NC_018871(YP_006908644.1), Bat_JQ989270(AFU92106.1), Bat_JQ989271(AFU92115.1), Bat_MK720946(QCX35183.1), Bat_MK720945(QCX35172.1), Bat_JQ989266(AFU92072.1), Bat_JQ989273(AFU92133.1), Bat_JQ989272(AFU92124.1), Bat_JQ989268(AFU92088.1), Bat_JQ989267(AFU92080.1), Bat_JQ989269(AFU92097.1), Bat_MK211373(QDF43811.1), Bat_MG916903(QBP43283.1), Bat_MG916902(QBP43272.1), Bat_MG916901(QBP43261.1), Bat_MG916904(QBP43294.1),
Cluster544
 Avian_MK581202(QDQ69131.1), Avian_MK581201(QDQ69118.1), Avian_MK581200(QDQ69105.1), Avian_KY805846(ARS23162.1),
Cluster545
 Bat_MK720944(QCX35162.1), Bat_NC_028833(YP_009201732.1), Fish_MH938449(AZF86126.1), Fish_MH938450(AZF86132.1), Fish_MH938448(AZF86120.1), Bat_KJ473809(AIA62267.1), Bat_NC_046964(YP_009755892.1),
Cluster546
 Murine_NC_035191(YP_009389426.1), Murine_NC_048211(YP_009824975.1),
Cluster547
 Bat_MN611524(QHA24720.1), Bat_MN611518(QHA24673.1), Bat_EU420138(ACA52166.1), Bat_NC_010438(YP_001718614.1), Bat_EU420139(ACA52173.1), Bat_EU420137(ACA52159.1), Bat_NC_010437(YP_001718607.1), Bat_KJ473795(AIA62202.1), Bat_KJ473796(AIA62208.1), Bat_KJ473797(AIA62214.1), Bat_KJ473798(AIA62222.1), Bat_KJ473799(AIA62229.1), Bat_KJ473800(AIA62236.1),
Cluster548
 Avian_GU393333(ADV71750.1), Avian_MN307884(QJE49276.1),
Cluster549
 Feline_FJ938062(ACT10972.1), Feline_FJ938055(ACT10898.1), Feline_FJ938053(ACT10878.1), Feline_JN183883(AEK25523.1), Feline_FJ938056(ACT10908.1), Feline_JN183882(AEK25513.1), Feline_HQ392469(ADO39819.1), Feline_HQ012372(ADL71499.1), Feline_HQ012371(ADL71488.1), Feline_HQ392472(ADO39852.1), Feline_FJ938061(ACT10961.1), Feline_HQ012370(ADL71478.1), Feline_GU553362(ADC35474.1), Feline_GU553361(ADC35463.1), Feline_HQ012369(ADL71468.1), Feline_HQ392471(ADO39841.1), Feline_FJ938060(ACT10950.1), Feline_HQ392470(ADO39830.1), Feline_HQ012368(ADL71457.1), Feline_FJ938058(ACT10929.1), Feline_FJ938057(ACT10918.1), Feline_FJ938052(ACT10867.1), Feline_FJ938059(ACT10939.1), Feline_KY566211(AUG98143.1), Feline_KY566210(AUG98132.1), Feline_KY566209(AUG98121.1), Feline_KY292377(ASB16889.1), Feline_KF530123(AGT52082.1), Feline_FJ938051(ACT10856.1), Feline_MN165107(QDM36989.1), Feline_KX722529(ASU62490.1), Feline_KU215419(AMD11132.1), Feline_KU215423(AMD11177.1), Feline_KU215428(AMD11232.1), Feline_KU215427(AMD11221.1), Feline_KU215426(AMD11210.1), Feline_KU215422(AMD11166.1), Feline_KU215421(AMD11155.1), Feline_KU215420(AMD11144.1), Feline_KU215425(AMD11199.1), Feline_KU215424(AMD11188.1), Feline_KX722530(ASU62501.1), Feline_KP143511(AJO27015.1), Feline_KP143510(AJO27005.1), Feline_KP143509(AJO26995.1), Feline_KP143508(AJO26985.1), Feline_KP143507(AJO26975.1), Feline_KP143512(AJO27025.1), Feline_MH817484(AYF53095.1),
Cluster550
 Mink_NC_023760(YP_009019188.1), Mink_HM245926(ADI80528.1), Mink_MF113046(AVY53341.1), Civet_HM245925(ADI80519.1),
Cluster551
 Avian_JX840411(AFX59337.1), Avian_MK581208(QDQ69209.1), Avian_MK581205(QDQ69170.1), Avian_MK581204(QDQ69157.1), Avian_MK581206(QDQ69183.1), Avian_MK581203(QDQ69144.1), Avian_MF924725(AYG86370.1), Avian_KP662631(AKC34141.1), Avian_MG197727(AXX83293.1), Avian_MF924724(AYG86357.1), Avian_KY933090(ATE90990.1), Avian_KY933089(ATE90976.1), Human_IBV_MK142676(QCX41905.1),
Cluster552
 Avian_LC364345(BBC54859.1), Avian_LC364346(BBC54868.1),
Cluster553
 Bat_MN611521(QHA24701.1),
Cluster554
 Avian_JX897900(AGC01544.1), Avian_KC008600(AGK85501.1), Avian_FJ904722(ADA83559.1), Avian_MK217375(QDA76248.1), Avian_MK217372(QDA76221.1), Avian_MH181793(QAT77251.1), Avian_MK581205(QDQ69162.1), Avian_KY407558(AQY61325.1), Avian_KY407556(AQY61307.1), Avian_KY407557(AQY61316.1), Avian_MK644086(QCQ81104.1), Avian_KX219801(APV46186.1), Avian_KY799582(AVI69487.1), Avian_KX252779(APY23544.1), Avian_KP868572(ALC78739.1), Avian_MK574043(QDA76284.1), Avian_MK574042(QDA76275.1), Avian_KC119407(AFY11709.1), Avian_KC013541(AFY11700.1), Avian_KP118894(AJR29315.1), Avian_KP790143(AKS25227.1), Avian_KT946798(AMR60482.1), Avian_JF893452(AEJ80240.1), Avian_EU714029(ACH72806.1), Avian_JQ977698(AFQ31012.1), Avian_MF924725(AYG86362.1), Avian_MG517474(AYD78151.1), Avian_HQ850618(AEB00717.1), Avian_HQ848267(AEB00708.1), Avian_HM245924(ADI54957.1), Avian_KM213963(AIY51830.1), Avian_KF668605(AHB78802.1), Avian_KF663560(AHB74001.1), Avian_KF663559(AHB73991.1), Avian_MK309398(QDM02504.1), Avian_KU361188(ANO81456.1), Avian_MF924724(AYG86349.1), Avian_KX266757(AOC59725.1), Avian_JF705860(AEO86770.1), Avian_DQ001338(AAY24425.1),
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