CoVDB Coronavirus Database (v3)   

Gene Clusters

  Distribution in Strains
Cluster450
 Avian_MK359255(QCB65100.1), Avian_NC_046965(YP_009755900.1),
Cluster451
 Bat_MF094685(AVM80480.1), Bat_MF094688(AVM80505.1), Bat_NC_009988(YP_001552241.1), Bat_EF203065(ABQ57221.1), Bat_EF203067(ABQ57237.1), Bat_EF203066(ABQ57229.1), Bat_EF203064(ABQ57213.1), Porcine_MH697599(QBP43305.1), Porcine_MK977618(QEH62674.1), Porcine_MK651076(QDE12102.1), Porcine_MH615810(AXP98444.1), Porcine_MG557844(AVM41575.1), Porcine_MG605091(AXY04097.1), Porcine_MG605090(AXY04088.1), Porcine_MF094684(AVM80471.1), Porcine_MF094683(AVM80462.1), Porcine_MF094682(AVM80453.1), Porcine_MF094681(AVM80444.1), Porcine_MF769444(AVM80781.1), Porcine_MF769443(AVM80772.1), Porcine_MF769442(AVM80763.1), Porcine_MF769432(AVM80673.1), Porcine_MF769426(AVM80619.1), Porcine_MF769441(AVM80754.1), Porcine_MF769427(AVM80628.1), Porcine_MF769416(AVM80529.1), Porcine_MF769437(AVM80718.1), Porcine_MF769428(AVM80637.1), Porcine_MF769438(AVM80727.1), Porcine_MF769433(AVM80682.1), Porcine_MF769434(AVM80691.1), Porcine_MF769435(AVM80700.1), Porcine_MF769417(AVM80538.1), Porcine_MF769429(AVM80646.1), Porcine_MF769436(AVM80709.1), Porcine_MF769420(AVM80565.1), Porcine_MF769421(AVM80574.1), Porcine_MF769418(AVM80547.1), Porcine_MF769422(AVM80583.1), Porcine_MF769431(AVM80664.1), Porcine_MF769419(AVM80556.1), Porcine_MF769425(AVM80610.1), Porcine_MF769439(AVM80736.1), Porcine_MF769430(AVM80655.1), Porcine_MF769424(AVM80601.1), Porcine_MF769423(AVM80592.1), Porcine_MF769440(AVM80745.1), Porcine_MF370205(ATN23894.1), Porcine_MG742313(AWJ64268.1), Porcine_MF167434(ASK51722.1), Porcine_MK994934(QID98956.1), Porcine_MK994935(QID98965.1), Porcine_MT199591(QJF53982.1), Porcine_MT199592(QJF53991.1),
Cluster452
 Bat_MN611522(QHA24708.1),
Cluster453
 Ape_GU553365(ADC35521.1), Bat_KU973692(ARO76391.1), Bat_KF569996(AHX37567.1), Bat_MG772933(AVP78039.1), Bat_DQ071615(AAZ67060.1), Bat_DQ412043(AAZ67041.1), Bat_DQ412042(AAZ67037.1), Bat_GQ153544(ADE34788.1), Bat_GQ153543(ADE34777.1), Bat_GQ153542(ADE34764.1), Bat_GQ153541(ADE34753.1), Bat_GQ153540(ADE34742.1), Bat_GQ153539(ADE34731.1), Bat_DQ084200(AAZ41349.1), Bat_DQ084199(AAZ41338.1), Bat_GQ153548(ADE34832.1), Bat_GQ153547(ADE34821.1), Bat_GQ153546(ADE34810.1), Bat_GQ153545(ADE34799.1), Bat_DQ022305(AAY88875.1), Bat_KU182964(ANA96036.1), Feline_AY572035(AAU04659.1), Feline_AY572034(AAU04643.1), Human_SARS_JX163926(AFR58724.1), Human_SARS_JX163928(AFR58752.1), Human_SARS_JX163927(AFR58738.1), Human_SARS_AY274119(AAP41048.1), Human_SARS_NC_004718(NP_828859.1), Human_SARS_DQ182595(ABA02278.1), Human_SARS_EU371559(ACB69857.1), Human_SARS_FJ882938(ACZ71942.1), Human_SARS_KF514423(AGT21329.1), Human_SARS_KF514396(AGT20924.1), Human_SARS_KF514418(AGT21254.1), Human_SARS_KF514409(AGT21119.1), Human_SARS_KF514397(AGT20939.1), Human_SARS_KF514408(AGT21104.1), Human_SARS_KF514394(AGT20894.1), Human_SARS_KF514419(AGT21269.1), Human_SARS_KF514404(AGT21044.1), Human_SARS_KF514400(AGT20984.1), Human_SARS_KF514415(AGT21209.1), Human_SARS_KF514413(AGT21179.1), Human_SARS_KF514388(AGT20804.1), Human_SARS_KF514392(AGT20864.1), Human_SARS_KF514422(AGT21314.1), Human_SARS_KF514421(AGT21299.1), Human_SARS_KF514399(AGT20969.1), Human_SARS_KF514398(AGT20954.1), Human_SARS_FJ882947(ACZ72074.1), Human_SARS_FJ882933(ACZ71867.1), Human_SARS_FJ882934(ACZ71882.1), Human_SARS_FJ882949(ACZ72104.1), Human_SARS_FJ882935(ACZ71897.1), Human_SARS_FJ882936(ACZ71912.1), Human_SARS_FJ882937(ACZ71927.1), Human_SARS_FJ882939(ACZ71957.1), Human_SARS_FJ882932(ACZ71852.1), Human_SARS_FJ882946(ACZ72061.1), Human_SARS_FJ882927(ACZ71778.1), Human_SARS_JF292921(AEA11009.1), Human_SARS_MK062180(AYV99772.1), Human_SARS_MK062184(AYV99828.1), Human_SARS_MK062183(AYV99814.1), Human_SARS_MK062182(AYV99800.1), Human_SARS_MK062181(AYV99786.1), Human_SARS_MK062179(AYV99758.1), Human_SARS_AP006561(BAC81415.1), Human_SARS_AP006560(BAC81401.1), Human_SARS_AP006559(BAC81387.1), Human_SARS_AP006558(BAC81373.1), Human_SARS_AP006557(BAC81359.1), Human_SARS_AY502932(AAR87607.1), Human_SARS_AY502931(AAR87596.1), Human_SARS_AY502930(AAR87585.1), Human_SARS_AY502929(AAR87574.1), Human_SARS_AY502928(AAR87563.1), Human_SARS_AY502927(AAR87552.1), Human_SARS_AY502926(AAR87541.1), Human_SARS_AY502925(AAR87530.1), Human_SARS_AY502924(AAR87519.1), Human_SARS_AY502923(AAR87508.1), Human_SARS_AY291451(AAP37025.1), Human_SARS_AY654624(AAT76156.1), Human_SARS_DQ497008(ABF65847.1), Human_SARS_DQ898174(ABI96969.1), Human_SARS_AY463060(AAR86786.1), Human_SARS_AY463059(AAR86796.1), Human_SARS_FJ882963(ACQ82736.1), Human_SARS_AY508724(AAR91594.1), Human_SARS_FJ882957(ACZ72221.1), Human_SARS_FJ882958(ACZ72236.1), Human_SARS_FJ882945(ACZ72046.1), Human_SARS_FJ882961(ACZ72280.1), Human_SARS_FJ882952(ACZ72147.1), Human_SARS_FJ882948(ACZ72089.1), Human_SARS_FJ882943(ACZ72016.1), Human_SARS_FJ882959(ACZ72250.1), Human_SARS_FJ882942(ACZ72001.1), Human_SARS_FJ882953(ACZ72162.1), Human_SARS_FJ882951(ACZ72132.1), Human_SARS_FJ882962(ACZ72294.1), Human_SARS_AY595412(AAT52331.1), Human_SARS_AY323977(AAP72985.1), Human_SARS_JQ316196(AFD56984.1), Human_SARS_GU553364(ADC35507.1), Human_SARS_GU553363(ADC35493.1), Human_SARS_JN854286(AFK10265.1), Human_SARS_AY390556(AAS00012.1), Human_SARS_AY278489(AAP51235.1), Human_SARS_AY291315(AAP33708.1), Human_SARS_AB257344(BAE93408.1), Human_SARS_AY310120(AAP50496.1), Human_SARS_FJ882926(ACZ71763.1), Human_SARS_FJ882930(ACZ71822.1), Human_SARS_KF514410(AGT21134.1), Human_SARS_KF514389(AGT20819.1), Human_SARS_KF514395(AGT20909.1), Human_SARS_KF514414(AGT21194.1), Human_SARS_KF514420(AGT21284.1), Human_SARS_KF514391(AGT20849.1), Human_SARS_KF514416(AGT21224.1), Human_SARS_KF514407(AGT21089.1), Human_SARS_KF514402(AGT21014.1), Human_SARS_KF514401(AGT20999.1), Human_SARS_KF514390(AGT20834.1), Human_SARS_KF514417(AGT21239.1), Human_SARS_KF514405(AGT21059.1), Human_SARS_KF514403(AGT21029.1), Human_SARS_KF514393(AGT20879.1), Human_SARS_KF514412(AGT21164.1), Human_SARS_KF514411(AGT21149.1), Human_SARS_KF514406(AGT21074.1), Human_SARS_FJ882941(ACZ71987.1), Human_SARS_FJ882950(ACZ72118.1), Human_SARS_FJ882956(ACZ72206.1), Human_SARS_FJ882954(ACZ72176.1), Human_SARS_FJ882940(ACZ71972.1), Human_SARS_FJ882960(ACZ72265.1), Human_SARS_FJ882944(ACZ72031.1), Human_SARS_FJ882955(ACZ72191.1), Human_SARS_FJ882931(ACZ71837.1), Human_SARS_FJ882929(ACZ71807.1), Human_SARS_FJ882928(ACZ71793.1), Human_SARS_JX162087(AFM43877.1), Human_SARS_JF292922(AEA11024.1), Human_SARS_AY278554(AAP13574.1), Human_SARS_AY345988(AAP94767.1), Human_SARS_AY345987(AAP94756.1), Human_SARS_AY345986(AAP94745.1), Human_SARS_EU371561(ACB69880.1), Human_SARS_EU371560(ACB69869.1), Human_SARS_EU371563(ACB69902.1), Human_SARS_EU371562(ACB69891.1), Human_SARS_EU371564(ACB69913.1), Human_SARS_AY278488(AAP30038.1), Human_SARS_AY427439(AAQ94071.1), Human_SARS_AY686863(AAV91641.1), Murine_JF292915(AEA10919.1), Murine_JF292914(AEA10904.1), Murine_JF292913(AEA10889.1), Murine_JF292912(AEA10874.1), Murine_JF292911(AEA10859.1), Murine_JF292920(AEA10994.1), Murine_JF292919(AEA10979.1), Murine_JF292918(AEA10964.1), Murine_JF292917(AEA10949.1), Murine_JF292916(AEA10934.1), Murine_JF292910(AEA10844.1), Murine_JF292909(AEA10829.1), Murine_JF292908(AEA10814.1), Murine_JF292907(AEA10799.1), Murine_HQ890541(AEA10634.1), Murine_HQ890546(AEA10709.1), Murine_HQ890545(AEA10694.1), Murine_HQ890544(AEA10679.1), Murine_HQ890543(AEA10664.1), Murine_HQ890542(AEA10649.1), Murine_JF292903(AEA10739.1), Murine_JF292902(AEA10724.1), Murine_HQ890533(AEA10514.1), Murine_HQ890532(AEA10499.1), Murine_HQ890531(AEA10484.1), Murine_JF292906(AEA10784.1), Murine_JF292905(AEA10769.1), Murine_JF292904(AEA10754.1), Murine_HQ890540(AEA10619.1), Murine_HQ890539(AEA10604.1), Murine_HQ890530(AEA10469.1), Murine_HQ890529(AEA10454.1), Murine_HQ890528(AEA10439.1), Murine_HQ890527(AEA10424.1), Murine_HQ890526(AEA10409.1), Murine_HQ890538(AEA10589.1), Murine_HQ890537(AEA10574.1), Murine_HQ890536(AEA10559.1), Murine_HQ890535(AEA10544.1), Murine_HQ890534(AEA10529.1), Civet_AY686864(AAV49740.1), Bat_FJ588686(ACU31040.1), Human_SARS_JX163923(AFR58682.1), Human_SARS_JX163924(AFR58696.1), Human_SARS_JX163925(AFR58710.1), Bat_KJ473811(AIA62286.1), Murine_MT308984(QJE50600.1),
Cluster454
 Mink_NC_023760(YP_009019187.1), Mink_HM245926(ADI80527.1), Mink_MF113046(AVY53340.1), Civet_HM245925(ADI80518.1),
Cluster455
 Avian_NC_016994(YP_005352868.1), Avian_JQ065047(AFD29231.1),
Cluster456
 Camel_KU291449(AOG74794.1), Camel_KT253326(AOI28280.1), Camel_KT253328(AOI28295.1), Camel_KT253324(AOI28263.1), Camel_KT253325(AOI28272.1), Camel_KT253327(AOI28288.1), Camel_JQ410000(AFI49436.1),
Cluster457
 Avian_NC_010800(YP_001941171.1), Avian_GQ427173(ACV87244.1), Avian_GQ427174(ACV87249.1), Avian_GQ427176(ACV87271.1), Avian_GQ427175(ACV87260.1), Avian_EU022526(ABW75143.1), Avian_EU022525(ABW75129.1), Avian_EU095850(ABW81432.1), Avian_JX840411(AFX59332.1), Avian_GQ504724(ADP06500.1), Avian_GQ504725(ADP06510.1), Avian_MK728875(QCE31538.1), Avian_GQ504723(ADP06495.1), Avian_GQ504722(ADP06484.1), Avian_MK581208(QDQ69204.1), Avian_MK581207(QDQ69191.1), Avian_MK581202(QDQ69126.1), Avian_MK581201(QDQ69113.1), Avian_MK581200(QDQ69100.1), Avian_MK581205(QDQ69165.1), Avian_MK581204(QDQ69152.1), Avian_MK581206(QDQ69178.1), Avian_MK581203(QDQ69139.1), Avian_KR231009(ALH21116.1), Avian_GQ504721(ADP06468.1), Avian_GQ504720(ADP06462.1), Avian_GU393338(ADV71817.1), Avian_GU393337(ADV71805.1), Avian_GU393336(ADV71792.1), Avian_GU393335(ADV71780.1), Avian_GU393334(ADV71767.1), Avian_GU393332(ADV71742.1), Avian_GU393331(ADV71729.1), Avian_MF508703(AWR92750.1), Avian_MH878976(AYS76110.1), Avian_MF421320(ASM61978.1), Avian_MF421319(ASM61965.1), Avian_MF924725(AYG86365.1), Avian_MH539772(AZP23945.1), Avian_MH539771(AZP23935.1), Avian_KY805846(ARS23157.1), Avian_KY805845(ARS23144.1), Avian_MN512438(QGM12434.1), Avian_MN512437(QGM12421.1), Avian_MN512436(QGM12409.1), Avian_MN512435(QGM12396.1), Avian_MN512434(QGM12383.1), Avian_MG517474(AYD78154.1), Avian_MG021194(AXR85437.1), Avian_MK878536(QCX19624.1), Avian_MN599049(QGX07415.1), Avian_MN566147(QHB80059.1), Avian_KP662631(AKC34137.1), Avian_KJ128295(AHN49815.1), Avian_MF882923(ATD12176.1), Avian_MG197727(AXX83288.1), Avian_MN197549(QGR15744.1), Avian_KU361187(ANO81448.1), Avian_MF924724(AYG86352.1), Avian_KX272465(APY20699.1), Avian_LN610099(CEK09113.1), Avian_KR822424(ALQ43520.1), Avian_KM454473(AKF17729.1), Avian_KY933090(ATE90985.1), Avian_KY933089(ATE90972.1), Human_IBV_MK142676(QCX41900.1), Avian_MN262644(QIM61648.1), Avian_MN307884(QJE49271.1),
Cluster458
 Avian_NC_016994(YP_005352869.1), Avian_JQ065047(AFD29232.1),
Cluster459
 Bat_MG021451(AVV62528.1), Bat_KX442564(ASL68944.1), Bat_KX442565(ASL68955.1), Bat_LC469308(BBJ36010.1), Bat_KJ473821(AHY61339.1), Human_MERS_MG987420(AWH65945.1), Human_MERS_MG987421(AWH65956.1),
Cluster460
 Bat_MG772934(AVP78050.1),
Cluster461
 Avian_MK359255(QCB65106.1), Avian_NC_046965(YP_009755909.1),
Cluster462
 Avian_NC_016993(YP_005352857.1), Avian_JQ065046(AFD29220.1),
Cluster463
 Bat_KY073745(APD51488.1), Bat_NC_048216(YP_009824972.1),
Cluster464
 Bat_KY352407(APO40587.1),
Copyright@ 2018-2023    Any Comments and suggestions mail to:  zhuzl@cqu.edu.cn, mg@cau.edu.cn   渝ICP备19006517号

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