CoVDB Coronavirus Database (v3)   

Gene Clusters

  Distribution in Strains
Cluster360
 Dolphin_KF793826(AHB63512.1), Dolphin_KF793825(AHB63499.1), Dolphin_KF793824(AHB63485.1), Whale_EU111742(ABW87824.1), Whale_NC_010646(YP_001876441.1), Dolphin_MN690608(QII89023.1), Dolphin_MN690609(QII89037.1), Dolphin_MN690610(QII89051.1), Dolphin_MN690611(QII89065.1),
Cluster361
 Bat_KT444582(ALK02463.1), Bat_KF367457(AGZ48836.1), Bat_KY417151(ATO98224.1), Bat_KY417150(ATO98211.1),
Cluster362
 Cow_NC_007447(YP_337910.1), Cow_LC088095(BAU21415.1), Cow_LC088094(BAU21409.1), Goat_NC_034976(YP_009380540.1), Harrisii_MK521914(QBJ04618.1), Horse_MG996765(AWV66921.1), Porcine_KM403390(AIU41588.1), Porcine_LT900503(SNT95687.1), Porcine_MH603532(QBK95471.1),
Cluster363
 Bat_MH687942(AYR18452.1),
Cluster364
 Murine_NC_034972(YP_009380525.1), Murine_KX964649(AQW43027.1),
Cluster365
 Feline_JQ408981(AFH55123.1),
Cluster366
 Bat_MN611518(QHA24676.1),
Cluster367
 Human_SARS_DQ182595(ABA02250.1),
Cluster368
 Porcine_NC_022787(YP_008798235.1),
Cluster369
 Fish_NC_008516(YP_803217.1), Fish_DQ898157(ABI97397.1),
Cluster370
 Dolphin_KF793826(AHB63515.1), Dolphin_KF793825(AHB63502.1), Dolphin_KF793824(AHB63488.1), Whale_EU111742(ABW87827.1), Whale_NC_010646(YP_001876444.1), Dolphin_MN690608(QII89026.1), Dolphin_MN690608(QII89027.1), Dolphin_MN690609(QII89040.1), Dolphin_MN690609(QII89041.1), Dolphin_MN690610(QII89054.1), Dolphin_MN690610(QII89055.1), Dolphin_MN690611(QII89068.1), Dolphin_MN690611(QII89069.1),
Cluster371
 Murine_AY910861(AAX23978.1), Murine_JQ173883(AFD97609.1), Murine_AF208066(AAF69340.1), Murine_AF208067(AAF69345.1), Murine_AC_000192(YP_209234.1), Murine_AY700211(AAU06357.1), Murine_MF618253(ATN37898.1), Murine_AF201929(AAF19387.1), Murine_AB551247(BAJ04697.1), Murine_KF268336(AGT17717.1), Murine_KF268339(AGT17750.1), Murine_KF268338(AGT17739.1), Murine_KF268337(AGT17728.1), Murine_JX169866(AFO11508.1), Murine_JX169867(AFO11518.1), Murine_FJ647222(ACN89732.1), Murine_FJ647219(ACN89695.1), Murine_FJ647221(ACN89715.1), Murine_FJ647226(ACN89764.1), Murine_FJ647223(ACN89734.1), Murine_NC_048217(YP_009824983.1),
Cluster372
 Bat_MK492263(QEH60470.1), Bat_NC_048212(YP_009824995.1),
Cluster373
 Bat_MG916904(QBP43292.1),
Cluster374
 Ape_GU553365(ADC35513.1), Bat_KT444582(ALK02459.1), Bat_KF367457(AGZ48833.1), Bat_KC881005(AGZ48808.1), Bat_KC881006(AGZ48820.1), Bat_KY417152(ATO98233.1), Bat_KY417151(ATO98220.1), Bat_KY417150(ATO98207.1), Bat_KY417149(ATO98195.1), Bat_KY417148(ATO98183.1), Bat_KY417147(ATO98171.1), Bat_KY417146(ATO98159.1), Bat_KY417144(ATO98134.1), Bat_KY417143(ATO98122.1), Bat_KY417145(ATO98147.1), Bat_KY417142(ATO98110.1), Bat_DQ412042(ABD75317.1), Bat_KU182964(ANA96029.1), Feline_AY572038(AAU04666.1), Feline_AY572035(AAU04651.1), Feline_AY572034(AAU04636.1), Human_SARS_JX163926(AFR58716.1), Human_SARS_JX163928(AFR58744.1), Human_SARS_JX163927(AFR58730.1), Human_SARS_AY274119(AAP41039.1), Human_SARS_NC_004718(NP_828853.1), Human_SARS_DQ182595(ABA02269.1), Human_SARS_EU371559(ACB69851.1), Human_SARS_FJ882938(ACZ71933.1), Human_SARS_KF514423(AGT21320.1), Human_SARS_KF514396(AGT20915.1), Human_SARS_KF514418(AGT21245.1), Human_SARS_KF514409(AGT21110.1), Human_SARS_KF514397(AGT20930.1), Human_SARS_KF514408(AGT21095.1), Human_SARS_KF514394(AGT20885.1), Human_SARS_KF514419(AGT21260.1), Human_SARS_KF514404(AGT21035.1), Human_SARS_KF514400(AGT20975.1), Human_SARS_KF514415(AGT21200.1), Human_SARS_KF514413(AGT21170.1), Human_SARS_KF514388(AGT20795.1), Human_SARS_KF514392(AGT20855.1), Human_SARS_KF514422(AGT21305.1), Human_SARS_KF514421(AGT21290.1), Human_SARS_KF514399(AGT20960.1), Human_SARS_KF514398(AGT20945.1), Human_SARS_FJ882947(ACZ72067.1), Human_SARS_FJ882933(ACZ71858.1), Human_SARS_FJ882934(ACZ71873.1), Human_SARS_FJ882949(ACZ72095.1), Human_SARS_FJ882935(ACZ71888.1), Human_SARS_FJ882936(ACZ71903.1), Human_SARS_FJ882937(ACZ71918.1), Human_SARS_FJ882939(ACZ71948.1), Human_SARS_FJ882932(ACZ71843.1), Human_SARS_FJ882946(ACZ72052.1), Human_SARS_FJ882927(ACZ71769.1), Human_SARS_JF292921(AEA11000.1), Human_SARS_AY772062(AAX16195.1), Human_SARS_AY278741(AAP13447.1), Human_SARS_MK062180(AYV99763.1), Human_SARS_MK062184(AYV99819.1), Human_SARS_MK062183(AYV99805.1), Human_SARS_MK062182(AYV99791.1), Human_SARS_MK062181(AYV99777.1), Human_SARS_MK062179(AYV99749.1), Human_SARS_AP006561(BAC81406.1), Human_SARS_AP006560(BAC81392.1), Human_SARS_AP006559(BAC81378.1), Human_SARS_AP006558(BAC81364.1), Human_SARS_AP006557(BAC81350.1), Human_SARS_AY502932(AAR87602.1), Human_SARS_AY502931(AAR87591.1), Human_SARS_AY502930(AAR87580.1), Human_SARS_AY502929(AAR87569.1), Human_SARS_AY502928(AAR87558.1), Human_SARS_AY502927(AAR87547.1), Human_SARS_AY502926(AAR87536.1), Human_SARS_AY502925(AAR87525.1), Human_SARS_AY502924(AAR87514.1), Human_SARS_AY502923(AAR87503.1), Human_SARS_AY291451(AAP37019.1), Human_SARS_AY654624(AAT76150.1), Human_SARS_AY348314(AAP97884.1), Human_SARS_AY338175(AAQ01611.1), Human_SARS_AY338174(AAQ01599.1), Human_SARS_DQ497008(ABF65838.1), Human_SARS_DQ898174(ABI96960.1), Human_SARS_AY485278(AAR23254.1), Human_SARS_AY485277(AAR23246.1), Human_SARS_AY463060(AAR86777.1), Human_SARS_AY463059(AAR86789.1), Human_SARS_FJ882963(ACQ82727.1), Human_SARS_AY508724(AAR91588.1), Human_SARS_FJ882957(ACZ72212.1), Human_SARS_FJ882958(ACZ72227.1), Human_SARS_FJ882945(ACZ72037.1), Human_SARS_FJ882961(ACZ72271.1), Human_SARS_FJ882952(ACZ72138.1), Human_SARS_FJ882948(ACZ72080.1), Human_SARS_FJ882943(ACZ72007.1), Human_SARS_FJ882959(ACZ72242.1), Human_SARS_FJ882942(ACZ71993.1), Human_SARS_FJ882953(ACZ72153.1), Human_SARS_FJ882951(ACZ72124.1), Human_SARS_FJ882962(ACZ72286.1), Human_SARS_AY595412(AAT52340.1), Human_SARS_AY323977(AAP72976.1), Human_SARS_JQ316196(AFD56975.1), Human_SARS_GU553364(ADC35499.1), Human_SARS_GU553363(ADC35485.1), Human_SARS_JN854286(AFK10256.1), Human_SARS_AY390556(AAS00005.1), Human_SARS_AY278489(AAP51229.1), Human_SARS_AY291315(AAP33699.1), Human_SARS_AB257344(BAE93403.1), Human_SARS_AY310120(AAP50487.1), Human_SARS_FJ882926(ACZ71754.1), Human_SARS_FJ882930(ACZ71813.1), Human_SARS_KF514410(AGT21125.1), Human_SARS_KF514389(AGT20810.1), Human_SARS_KF514395(AGT20900.1), Human_SARS_KF514414(AGT21185.1), Human_SARS_KF514420(AGT21275.1), Human_SARS_KF514391(AGT20840.1), Human_SARS_KF514416(AGT21215.1), Human_SARS_KF514407(AGT21080.1), Human_SARS_KF514402(AGT21005.1), Human_SARS_KF514401(AGT20990.1), Human_SARS_KF514390(AGT20825.1), Human_SARS_KF514417(AGT21230.1), Human_SARS_KF514405(AGT21050.1), Human_SARS_KF514403(AGT21020.1), Human_SARS_KF514393(AGT20870.1), Human_SARS_KF514412(AGT21155.1), Human_SARS_KF514411(AGT21140.1), Human_SARS_KF514406(AGT21065.1), Human_SARS_FJ882941(ACZ71978.1), Human_SARS_FJ882950(ACZ72110.1), Human_SARS_FJ882956(ACZ72197.1), Human_SARS_FJ882940(ACZ71963.1), Human_SARS_FJ882960(ACZ72256.1), Human_SARS_FJ882944(ACZ72022.1), Human_SARS_FJ882955(ACZ72182.1), Human_SARS_FJ882931(ACZ71828.1), Human_SARS_FJ882928(ACZ71784.1), Human_SARS_JX162087(AFM43869.1), Human_SARS_JF292922(AEA11015.1), Human_SARS_AY278554(AAP13569.1), Human_SARS_AY345988(AAP94761.1), Human_SARS_AY345987(AAP94750.1), Human_SARS_AY345986(AAP94739.1), Human_SARS_AY714217(AAU81613.1), Human_SARS_AY864806(AAY60795.1), Human_SARS_EU371561(ACB69874.1), Human_SARS_EU371560(ACB69862.1), Human_SARS_EU371563(ACB69897.1), Human_SARS_EU371562(ACB69885.1), Human_SARS_EU371564(ACB69907.1), Human_SARS_AY864805(AAY60782.1), Human_SARS_AY278488(AAP30032.1), Human_SARS_AY427439(AAQ94062.1), Human_SARS_AY686863(AAV91633.1), Murine_JF292915(AEA10910.1), Murine_JF292914(AEA10895.1), Murine_JF292913(AEA10880.1), Murine_JF292912(AEA10865.1), Murine_JF292911(AEA10850.1), Murine_JF292920(AEA10985.1), Murine_JF292919(AEA10970.1), Murine_JF292918(AEA10955.1), Murine_JF292917(AEA10940.1), Murine_JF292916(AEA10925.1), Murine_JF292910(AEA10835.1), Murine_JF292909(AEA10820.1), Murine_JF292908(AEA10805.1), Murine_JF292907(AEA10790.1), Murine_HQ890541(AEA10625.1), Murine_HQ890546(AEA10700.1), Murine_HQ890545(AEA10685.1), Murine_HQ890544(AEA10670.1), Murine_HQ890543(AEA10655.1), Murine_HQ890542(AEA10640.1), Murine_JF292903(AEA10730.1), Murine_JF292902(AEA10715.1), Murine_HQ890533(AEA10505.1), Murine_HQ890532(AEA10490.1), Murine_HQ890531(AEA10475.1), Murine_JF292906(AEA10775.1), Murine_JF292905(AEA10760.1), Murine_JF292904(AEA10745.1), Murine_HQ890540(AEA10610.1), Murine_HQ890539(AEA10595.1), Murine_HQ890530(AEA10460.1), Murine_HQ890529(AEA10445.1), Murine_HQ890528(AEA10430.1), Murine_HQ890527(AEA10415.1), Murine_HQ890526(AEA10400.1), Murine_HQ890538(AEA10580.1), Murine_HQ890537(AEA10565.1), Murine_HQ890536(AEA10550.1), Murine_HQ890535(AEA10535.1), Murine_HQ890534(AEA10520.1), Civet_AY686864(AAV49732.1), Bat_FJ588686(ACU31033.1), Human_SARS_JX163923(AFR58674.1), Human_SARS_JX163924(AFR58688.1), Human_SARS_JX163925(AFR58702.1), Bat_KJ473811(AIA62279.1), Murine_MT308984(QJE50591.1),
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