CoVDB Coronavirus Database (v3)   

Gene Clusters

  Distribution in Strains
Cluster315
 Avian_MN611523(QHA24711.1), Bat_NC_018871(YP_006908643.1), Bat_JQ989270(AFU92105.1), Bat_JQ989271(AFU92114.1), Bat_JQ989266(AFU92071.1), Bat_JQ989273(AFU92132.1), Bat_JQ989272(AFU92123.1), Bat_JQ989268(AFU92087.1), Bat_JQ989267(AFU92079.1), Bat_JQ989269(AFU92096.1),
Cluster316
 Avian_LC364344(BBC54847.1), Avian_LC364343(BBC54837.1), Avian_LC364342(BBC54827.1),
Cluster317
 Bat_MG916904(QBP43291.1),
Cluster318
 Avian_MN611525(QHA24725.1),
Cluster319
 Fish_MH938449(AZF86125.1), Fish_MH938450(AZF86131.1), Bat_NC_046964(YP_009755891.1),
Cluster320
 Avian_NC_016994(YP_005352865.1), Avian_JQ065047(AFD29228.1),
Cluster321
 Avian_NC_016995(YP_005352873.1), Avian_JQ065048(AFD29236.1),
Cluster322
 Fish_MH938448(AZF86119.1),
Cluster323
 Turtle_MF685025(AXP11710.1),
Cluster324
 Snake_NC_035465(YP_009408173.1), Snake_NC_024709(YP_009052479.1), Snake_MG752895(AUS29613.1),
Cluster325
 Murine_NC_034972(YP_009380522.1), Murine_KX964649(AQW43024.1),
Cluster326
 Canine_JQ404410(AFG19747.1), Canine_KC175341(AFX81115.1), Canine_KC175340(AFX81105.1), Canine_GQ477367(ADB28915.1), Canine_KP981644(AKA65837.1), Canine_JN856008(AEQ61975.1), Canine_JQ404409(AFG19727.1), Canine_KY063618(ASB15764.1), Canine_KY063617(ASB15756.1), Canine_KY063616(ASB15746.1), Canine_KP849472(AKZ66480.1),
Cluster327
 Dolphin_KF793826(AHB63519.1), Dolphin_KF793825(AHB63505.1), Dolphin_KF793824(AHB63492.1), Whale_EU111742(ABW87830.1), Whale_NC_010646(YP_001876447.1), Dolphin_MN690608(QII89030.1), Dolphin_MN690609(QII89044.1), Dolphin_MN690610(QII89058.1), Dolphin_MN690611(QII89072.1),
Cluster328
 Camel_KF906251(AHN64797.1), Camel_KF906250(AHN64788.1), Camel_KF906249(AHN64779.1), Camel_KT368891(ALA50085.1), Canine_JX860640(AFW97367.1), Canine_KX432213(AQT26505.1), Cow_FJ938066(ACT11025.1), Cow_FJ938065(ACT11014.1), Cow_NC_003045(NP_150084.1), Cow_AF220295(AAL40407.1), Cow_AF391542(AAL57314.1), Cow_AF391541(AAK83363.1), Cow_FJ938063(ACT10990.1), Cow_FJ938064(ACT11002.1), Cow_DQ811784(AED01932.1), Cow_KU558923(ANJ04735.1), Cow_KU558922(ANJ04724.1), Human_OC43_AY391777(AAR01020.1), Human_OC43_KY369907(APU51937.1), Human_OC43_MN306053(QEG03799.1), Human_OC43_MN310476(QEG03809.1), Human_OC43_KY369905(APU51922.1), Human_OC43_KY369906(APU51932.1), Human_OC43_KY983588(ARU07615.1), Human_OC43_KY983585(ARU07592.1), Human_OC43_KY967358(ARK08656.1), Human_OC43_KY967359(ARK08666.1), Human_OC43_KY983583(ARU07573.1), Human_OC43_KY967361(ARK08684.1), Human_OC43_KY684759(ARA15426.1), Human_OC43_MN306043(QEG03782.1), Human_OC43_MN306042(QEG03772.1), Human_OC43_MN306041(QEG03762.1), Human_OC43_MN310478(QEG03819.1), Human_OC43_MN306036(QEG03745.1), Human_OC43_KF530081(AGT51625.1), Human_OC43_KF530070(AGT51516.1), Human_OC43_KF530069(AGT51506.1), Human_OC43_KF530099(AGT51805.1), Human_OC43_KF530080(AGT51615.1), Human_OC43_KF530072(AGT51536.1), Human_OC43_KF530098(AGT51795.1), Human_OC43_KF530064(AGT51456.1), Human_OC43_KF530063(AGT51446.1), Human_OC43_KF530078(AGT51595.1), Human_OC43_KF530075(AGT51566.1), Human_OC43_KF530084(AGT51655.1), Human_OC43_KF530090(AGT51715.1), Human_OC43_KF530071(AGT51526.1), Human_OC43_KF530074(AGT51556.1), Human_OC43_KF530097(AGT51785.1), Human_OC43_KF530079(AGT51605.1), Human_OC43_KF530095(AGT51765.1), Human_OC43_KF530094(AGT51755.1), Human_OC43_KF530082(AGT51635.1), Human_OC43_KF530067(AGT51486.1), Human_OC43_KF530089(AGT51705.1), Human_OC43_KF530091(AGT51725.1), Human_OC43_KF530096(AGT51775.1), Human_OC43_KF530076(AGT51575.1), Human_OC43_KF530088(AGT51695.1), Human_OC43_KF530061(AGT51427.1), Human_OC43_KF530065(AGT51466.1), Human_OC43_KF530066(AGT51476.1), Human_OC43_KF530073(AGT51546.1), Human_OC43_KF530087(AGT51685.1), Human_OC43_KF530083(AGT51645.1), Human_OC43_KF530077(AGT51585.1), Human_OC43_KF530086(AGT51675.1), Human_OC43_KF530085(AGT51665.1), Human_OC43_KF530060(AGT51417.1), Human_OC43_KF530092(AGT51735.1), Human_OC43_KF530068(AGT51496.1), Human_OC43_KY554975(ARE30016.1), Human_OC43_KY554974(ARE30007.1), Human_OC43_KY554973(ARE29998.1), Human_OC43_KY554972(ARE29989.1), Human_OC43_AY903459(AAX85674.1), Human_OC43_AY903460(AAX85683.1), Human_OC43_MN026164(QDH43714.1), Human_OC43_MK303619(QBP84709.1), Human_OC43_MK303621(QBP84727.1), Human_OC43_MK303620(QBP84718.1), Human_OC43_MK303625(QBQ01844.1), Human_OC43_MK303624(QBP84754.1), Human_OC43_MK303623(QBP84745.1), Human_OC43_MK303622(QBP84736.1), Human_OC43_KX344031(AOL02458.1), Human_OC43_MF374983(AVR40343.1), Human_OC43_MF374985(AVR40345.1), Human_OC43_MH121121(AZP73845.1), Human_OC43_KY014282(ATP16772.1), Human_OC43_KY014281(ATP16762.1), Human_4408_FJ938067(ACT11037.1), Deer_MG518518(AVN88330.1), Deer_FJ425190(ACJ67019.1), Deer_FJ425189(ACJ67007.1), Horse_EF446615(ABP87996.1), Horse_LC061272(BAS18851.1), Horse_LC061274(BAS18871.1), Horse_LC061273(BAS18861.1), Alpaca_DQ915164(ABI94004.1), Porcine_DQ011855(AAY68303.1), Porcine_KY419103(ARC95208.1), Porcine_KY419106(ARC95232.1), Porcine_KY419112(ARC95272.1), Porcine_KY419111(ARC95264.1), Porcine_KY419109(ARC95248.1), Porcine_KY419113(ARC95279.1), Porcine_KY419110(ARC95256.1), Porcine_KY419107(ARC95240.1), Porcine_KY419105(ARC95224.1), Porcine_KY419104(ARC95216.1), Porcine_KY994645(AUF40281.1), Porcine_MF083115(AVV64340.1),
Cluster329
 Murine_NC_012936(YP_003029853.1), Murine_AY910861(AAX23984.1), Murine_JF792617(AFG25765.1), Murine_JF792616(AFG25755.1), Murine_AC_000192(YP_209239.1), Murine_MF618252(ATN37893.1), Murine_MF618253(ATN37903.1), Murine_FJ884687(ACO72898.1), Murine_FJ884686(ACO72889.1), Murine_AB551247(BAJ04702.1), Murine_KF268336(AGT17722.1), Murine_KF268339(AGT17755.1), Murine_KF268338(AGT17744.1), Murine_KF268337(AGT17733.1), Murine_FJ647222(ACN89731.1), Murine_FJ647219(ACN89694.1), Murine_FJ647227(ACN89776.1), Murine_FJ647221(ACN89717.1), Murine_FJ647220(ACN89706.1), Murine_FJ647218(ACN89684.1), Murine_FJ647226(ACN89765.1), Murine_FJ647224(ACN89746.1), Murine_FJ647225(ACN89752.1), Murine_FJ938068(ACT11047.1),
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